Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0709 ATGGACGTCGGCGAGGACACCACGGATCCAAGTTACTGGCAAAAGCCTATGGCGAGTTTTCTCATACGTAATCACTCGGACCAGCTCCGTTGCATTGCTTCCTCTCCAGATTCCAAGCTTTATTACCCCCTCTTCGTCGATTTCGCAGAGTTGATGGATGATGACCCTCACCTTGCCCATCTCATCTTCACCGAACCCGCTACATATTTACAAATATTCGACCAGGCTGCTGTTTGGGCCCATAAAATCATATTGGAAGATTCGGGAGCAGACAAGAAATGGGTTGAGAAAAAGATGATTCATGTCCGCATTAATACAAGCGGCTCTCCACTTGAATGCCCGGACTTTCCAAGCATAGGACGTATTAGAGTGAAGCACCGGGGGATTCTTCTAACTCAAGGGACAGTAATCCGGTCAGGAGCAATAAAGATGCATGAAGGAGAGAGGGAGTACATGTGCCTAAAGTGCAAGAAGAGCTTCCTAGTTTATCCAGAGGTGGAAGCACGAAACTCCATAACACTACCTTCAAATTGTCAAGTTCGGGGGTCTAAGCCCTGTGGAGGAGCAAAATTCCAGTATGTAGATAATACTATAGTATGCCATGATTATCAAGAGATAAAAATCCAAGAAAGCACGCAGGTTCTTGGTGTTGGGGTGATTCCTCGTTCAATCCTTGTCATCTTGAAGGATGACCTTGTTGACATTGTTAAAGCTGGAGATGATGTAATTTGTTCTGGGGTGTTAACAGCAAAATGGTCATCAGAAGTCAAAGATGTACGCTGTGACCTTGATCCTGTACTAATAGCCAATCGTGTAAGGAGAACAAATGAACTGAAGTCAGAAATTGATATTCCTGATGATCTTGTTATGAAATTCAAACAATTCTGGATCCACTTCAAAGATTGTCCTTTGAAAGGGAGGAATGCTATTTTACGAGGAATTTGCCCACAAGTATTTGGACTCTTCACTGTCAAGCTGGCAGTTGCATTAACACTTATTGGAGGTGTGCAACATGTCCATGCTTCTGGAACAAAGGTTCGAGGAGAACCCCACTTACTCTTGGTTGGCGATCCTGGCACAGGGAAATCTCAGTTGAAATTTGCTGCAAAATTGAGCAATAGATCTGTAGTTACCACTGGCATGGGAAGCACGAGTGCAGGATTGACTGTTACTGCTGTGAAGGATGGAGGAGAATGGATGTTGGAAGCTGGAGCCCTTGTTCTGGCAGATGGTGGGTTGTGTTGCATTGATGAATTTGATAGTATGAGGGAACATGACAGAGCAACCATACATGAAGCCATGGAGCAGCAGACTATAAGCGTTGCTAAGGCTGGTCTTGTAACAACACTCAGCACTAGAACAACAGTTTTTGCTACAAATCCTAAGGGACATTATGATCCCGAAAACTTAGCTCTATCTGTCAACAAAACACTCTCTGGTCCTTTATTAAGCAGGTTCGATATAGTCCTTGTGCCTCTTGGATAAAAGAATCCTGAATGGGACGCGGTAGTTTCAGCTCATATTCTCAATGAGGCAGAACCAGATAAAGCAAGGCAAGACGAAGATCTAGCAAATAGGCCCCTTCCTTTGCTCAAGAGAATCTTCAACTACGTAAAAGAAACCTTCAAACCAGTCCTTACAAGAGAGGCTGAGACAGTCATATCCAGTTATTATCAACTCCAAAGGAGATCTGGAACTCATAATGCAGCTAGGACAACTGTTCGCATGCTGGAAAGTTTGGTTCGCCTAGCTCAAGCTCATGCAAGGTTGATGTTCAGAAATGAGGTGACTCGATTAGATGCCATCACAGCCATTTTATGCATAGAATCTTCAATGACTACCTCTGCTATAGTCGATTGCATTGGTAATGCTCTGCATTCCAATTTTACTGAAAACCCTGACGAGGAATGTATCCTTGCAAAATGTGGTTTCACATGA 1938 0.437 MDVGEDTTDPSYWQKPMASFLIRNHSDQLRCIASSPDSKLYYPLFVDFAELMDDDPHLAHLIFTEPATYLQIFDQAAVWAHKIILEDSGADKKWVEKKMIHVRINTSGSPLECPDFPSIGRIRVKHRGILLTLXGTVIRSGAIKMHEGEREYMCLKCKKSFLVYPEVEARNSITLPSNCQVRGSKPCGGAKFQYVDNTIVCHDYQEIKIQESTQVLGVGVIPRSILVILKDDLVDIVKAGDDVICSGVLTAKWSSEVKDVRCDLDPVLIANRVRRTNELKSEIDIPDDLVMKFKQFWIHFKDCPLKGRNAILRGICPQVFGLFTVKLAVALTLIGGVQHVHASGTKVRGEPHLLLVGDPGTGKSQFXKFAAKLSNRSVVTTGMGSTSAGLTVTAVKDGGEWMLEAGALVLADGGLCCIDEFDSMREHDRATIHEAMEQQTISVAKAGLVTTLSTRTTVFGXTNPKGHYDPENLALSVNKTLSGPLLSRFDIVLVPLGXKNPEWDAVVSAHILNEAEPDKARQDEDLANIXPLPLLKRIFNYVKETFKPVLTREAETVISSYYQLQRRSGTHNAARTTVRMLESLVRLAQAHARLMFRNEVTRLDAITAILCIESSMTTSAIVDCIGNALHSNFTENPDEECILAKCGFT 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0709 649 Pfam MCM AAA-lid domain 535 615 IPR041562 -
Prci3g0709 649 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 43 621 IPR031327 GO:0003677|GO:0005524|GO:0032508
Prci3g0709 649 SMART AAA_5 349 499 IPR003593 GO:0016887
Prci3g0709 649 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 317 625 IPR027417 -
Prci3g0709 649 PRINTS Mini-chromosome maintenance (MCM) protein family signature 485 493 IPR001208 GO:0003677|GO:0005524|GO:0032508
Prci3g0709 649 PRINTS Mini-chromosome maintenance (MCM) protein family signature 348 363 IPR001208 GO:0003677|GO:0005524|GO:0032508
Prci3g0709 649 PRINTS Mini-chromosome maintenance (MCM) protein family signature 434 447 IPR001208 GO:0003677|GO:0005524|GO:0032508
Prci3g0709 649 PRINTS Mini-chromosome maintenance (MCM) protein family signature 406 420 IPR001208 GO:0003677|GO:0005524|GO:0032508
Prci3g0709 649 SMART mcm 115 617 IPR031327 GO:0003677|GO:0005524|GO:0032508
Prci3g0709 649 Gene3D - 121 251 IPR012340 -
Prci3g0709 649 Gene3D - 146 202 - -
Prci3g0709 649 ProSiteProfiles MCM family domain profile. 307 511 IPR001208 GO:0003677|GO:0005524|GO:0032508
Prci3g0709 649 Pfam MCM P-loop domain 309 513 IPR001208 GO:0003677|GO:0005524|GO:0032508
Prci3g0709 649 FunFam Probable DNA helicase MCM9 285 620 - -
Prci3g0709 649 SUPERFAMILY Nucleic acid-binding proteins 42 258 IPR012340 -
Prci3g0709 649 Pfam MCM OB domain 121 250 IPR033762 -
Prci3g0709 649 Gene3D - 302 621 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0709 Prci-Chr3 9269210 9279408 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0709 5 645 Core DNA Replication Machinery Family AT2G14050 73.178 0.0 966
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0709 K10738 - gmx:100776255 1040.41