Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0706 ATGAACCTCTTTGTCTATGACAATCTAGCCCCTTTATACATATCAAAGTTGAACGGGCAGGGCCCCTTGAATTTCTCCTGGGTCTGTCCTCGATTGTCTTTGAAGGAGATTTTTGATGCTCTTATCCATGGAGGTCATCACTTACATATCCAGTTAAGATTACATTGGAGAAGCCAGAAACTAATATTTCATTCCAGGCCTTCCCTTCTCGATTCACGCGTCAACCATGCTCCATCTCCAAGCCATGACTGCGTATCAGTTGTGCCACTAGACACGTATCTGTCCATTAAAGCCAAGCCAAAAAATCATGATAATGAAAGCAGCAGCAAAGGACAGAGATCAGTGTCGGTGACATGGCAAGACTTGTGTGTGACTGTTCCAAGTGGGAAGAACAAGAAACCTATTTTGAAGAGTCTCACTGGCTATGCCAAGCCTGGACAGCTTTTGGCTATCATGGGTCCTTCTGGCTCCGGCAAGACCACTCTCCTTGATGCCCTTGCAGGAAGATTGGGTTCAAACACAAAGCAAACTGGGAAGATTCTTATCAACGGCCACAAAGAGGCACTAGCTTATGGAACATCTGCATATGTCACCCAAGATGATGCTATGTTGTCGACTTTAACGGCCGGAGAAGCTTTATATTACTCATGCCAGCTCCAACTTCCAGATTCCATGTCCATGGAAGAGAAGAAGGAGAGAGCAGACTCTACACTAAGAGAAATGGGTCTACAAGATGCCATCCATACAAGGATTGGGGGGTGGACTTCGAAAGGACTTAGCAGTGGACAAAAGAGAAGACTTAGCATTTGCATTGAGATTATAACACATCCCAAGCTTCTCTTCCTTGATGAACCAACCAGTGGTCTTGATAGTGCAGCTTCGTATTATGTTATGAGTAGAATTGCAAGACTCATTAAGTTAAGGGATGGCATTCAAAGGACTATTGTAGTAGCTATCCATCAGCCTAGTAGTGAAGTTTTTCAATTTTTCCACAACCTCTGTCTTTTGTCTTCTGGTGAAACAGTATATTTTGGCCCTGCTTTAGATACAAATGAGTTTTTTGCTTCAAATGGTTTTCCTTGCCCAAGTTTGAACAATCCTTCTGATCATTTCTTGAGGATCATAAACAAAGATTTTGACCAGGATGCTGAAGAAGGCTTTGGTAAAGGTGTAACTACAGAAGAAGCTATTAATATCCTCATCAAGTCCTATATGTCATCCACAATTCAGAAACAAATTCAAAAAGAAATGGAAGAAGTAATTGATAGTGATTCTAATGCAATAGAGAAGAAGAGAATCCATGCTGGATTCTTGACCCAATGCCTCATTCTTATAAGAAGATCTTCCCTTCATATGCTTCGTAATATAAGCAATTATTGGTTACGCCTAGCAGTATATACTGCACTTTCTTTAAGTCTGGGCACTATATTCTACAACATTGGCTTAAGTAATGGAGCTATTCAGGCTAGAGGGTCGTTGCTCACTTTCTTTATTTCAATCCTCTCTTTCATAACCCTCATTGGTGGATTACCTCCACTTTTGGAAGAAATGAAGGTATTTAAACGAGAGAGGTTGAATGGGCATTATGGTGTTACTGCTTTCCTTATTGGCAACACATTATCTACTATACCCTATATGCTACTGATGTCTTTAATACCTGCTCTTATAATATACTATCTCTCTAACCTGCACAAAGGACTTGGACGCTTTGTGTATTTAGTTTCTGTGCTATTTGCCATTGTAATGTCTATTGAGAGCTGTATGCTTGTTATTGGGAGTATCTTCCCTAATTTCATAATGGGGATGATCATTGTTGGTGGGATTCAAGGAATCATGATCCTGATTGGTGGATTCTATAGATTGCCCCATGATCTTCCTAAGCTTGTTTGGAGATACCCTTTACATTATGTTTCATTCCACAAATATGCCTTCCAAGGATTGTTCAAGAATGAATTTGACGGTTTAACGTTTGTGGTTGATGATCAAGATAGAAGTAGAAGCATGATTGTGAGTGGTAGAGAAATCTTAAGAAATACTTGGCAGGTTGAAATGGGTCATTCTAAGTGGCTTGATCTTGCTATCATGTTTGGAATGATTGTTCTGTATCATATTTTATTCCTGATCATTAATAAGAGCAAAGAGAAGGCTCATAGACAAGTGGCTAGTTGA 2169 0.4006 MNLFVYDNLAPLYISKLNGQGPLNFSWVCPRLSLKEIFDALIHGGHHLHIQLRLHWRSQKLIFHSRPSLLDSRVNHAPSPSHDCVSVVPLDTYLSIKAKPKNHDNESSSKGQRSVSVTWQDLCVTVPSGKNKKPILKSLTGYAKPGQLLAIMGPSGSGKTTLLDALAGRLGSNTKQTGKILINGHKEALAYGTSAYVTQDDAMLSTLTAGEALYYSCQLQLPDSMSMEEKKERADSTLREMGLQDAIHTRIGGWTSKGLSSGQKRRLSICIEIITHPKLLFLDEPTSGLDSAASYYVMSRIARLIKLRDGIQRTIVVAIHQPSSEVFQFFHNLCLLSSGETVYFGPALDTNEFFASNGFPCPSLNNPSDHFLRIINKDFDQDAEEGFGKGVTTEEAINILIKSYMSSTIQKQIQKEMEEVIDSDSNAIEKKRIHAGFLTQCLILIRRSSLHMLRNISNYWLRLAVYTALSLSLGTIFYNIGLSNGAIQARGSLLTFFISILSFITLIGGLPPLLEEMKVFKRERLNGHYGVTAFLIGNTLSTIPYMLLMSLIPALIIYYLSNLHKGLGRFVYLVSVLFAIVMSIESCMLVIGSIFPNFIMGMIIVGGIQGIMILIGGFYRLPHDLPKLVWRYPLHYVSFHKYAFQGLFKNEFDGLTFVVDDQDRSRSMIVSGREILRNTWQVEMGHSKWLDLAIMFGMIVLYHILFLIINKSKEKAHRQVAS 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0706 722 Pfam ABC-2 type transporter 320 377 IPR043926 GO:0140359
Prci3g0706 722 Pfam ABC-2 type transporter 439 652 IPR013525 GO:0016020|GO:0140359
Prci3g0706 722 FunFam ABC transporter G family member 11 115 403 - -
Prci3g0706 722 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 118 350 IPR027417 -
Prci3g0706 722 Gene3D - 116 366 IPR027417 -
Prci3g0706 722 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 117 363 IPR003439 GO:0005524
Prci3g0706 722 Pfam ABC transporter 136 287 IPR003439 GO:0005524
Prci3g0706 722 ProSitePatterns ABC transporters family signature. 259 273 IPR017871 GO:0005524|GO:0016887
Prci3g0706 722 SMART AAA_5 145 335 IPR003593 GO:0016887
Prci3g0706 722 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 107 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0706 Prci-Chr3 9228139 9233732 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0706 135 345 Calmodulin-binding Proteins AT2G36910 24.658 4.98e-06 48.1