Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0705 ATGATGAGTTGCTTTCTGAAACCCGACCACCATGGGTCCTCAAGACGAGGGCAAATTGTGAGCCTGGAAATGGAAGAGAGAACAGAGATAGCAGTAGCAGAAGAAGAAGAAGGTATCTGGCTGACATGGGAGGATCTGAGCGTGACAGTGTCAAATGGAAAAGACAAGTCGAAGCCAATCCTTCAAGGCCTCACTGGTTATGCCAAGCCAGGACAGCTCTTAGCCATAATGGGTCCTTCTGGTTGTGGCAAATCCACCTTCCTTGATGCCTTAGCAGGGAGGTTGTGTGCAAAGGCAAAGCAGACAGGAGATATCCTTATCAATGGCCACAAAAAAGCACTAGCCTATGGAACATCAGCATATCTGACGCAAGACGATTCAATATTGACGACCCTTACGGTGGGAGAAGCAGTGCACTACTCAGCTCAGCTGCAACTTCCGGATTCAATGACGAAGTCAGAGAAGAAGGAGAGAGCGGACTTCTCAATCAGGGAAATGGGTCTGCAAGACGTCATTAACACAAGGATTGGAGGGTGTGGAGGTTCTAAAGGAATCAGTGGAGGCCAAAAGAGGAGGGTTAGCATGTGCATTGAGATTCTCACACGCCCTAGCCTTTTATTCCTTGATGAACCAACCAGTGGCCTTGATAGTGCAGCTTCTTACTACGTCATGAGTAGAATTGCAAGCTTGAATGAGAAGGATGGAGTTCAGAGGACTATTATTGCAGCAATACATCAGCCGAGTAGTGAGGTTTTCCAGCTTTTTCACGACCTTTGTCTTCTGTCTTCTGGTCAAGCAGTGTACTTTGGCCCCGCTTCTGCTGCTAATGAGTTTTTTGCATCAAATGGTTTTCCCTGCCCAACTCTCAGGAACCCCTCTGATCATTTTGTAAAGACCATCAACAATGATTTTGAGATGGAGGACCCTGAGCAAGGATTATCAGAAGGACTAACCACAGAAGAAACAGTTAATATTCTTGTGAAATCATACGAGTCATCTGCAATCAGTCACCAAGTTCAAACAGAAGTAGTTAAAATAAGATCAAGGAATTCTGGTGCAATGGAGCTGAAAAGGCATGCTTCATTCCTCAAGCAGTGCATCATTCTTACAAGAAGATCATTTGTGAATATGTATCGCGACGTAGGCTACTACTGGTTACGTCTACTTGTCCATGGTGGATTGGCTATAACTCTAGGCACTATCTTCTACAATATAGGCTCAAGCGAATCAGTTCAGATAAGAGGCTCACTGCTCATGTTTGTGGCCACATTCCTGAGTTTCATAACCATTTGTGGATTCTCTTCCCTTGTGGTTGACATGAAGGTGTTTGAAAGAGAGAGACTAAATGGGCATTATGGTGTTGCTGCATACACCATTGGACACACATTCTCTTGTATTCCGTTCTTGTTATTGATGTCACTGATTCCAGGAGCAATAGTTTATTACCTAACCGGACTTCATCAAGGTGGTCAACATTTTCTGTACTTCGCTTCTGTGCTTTTCATCTCAGTCATGCTGGTTGAGAGCTTCATGATGATTGTTGCAAGCATGCTTCCAAACTTCTTGATGGGGATGATCGCTGGAGCTGGAGTTCTGGGAGTAATGATGTTAAATGGCGGATTCTATCGCCTTCCTTCAGAACTTCCAAGGTTCTTATGGAGGTATCCTTGTTACTACATTTCCATTCACAGGTATGCTTACCATGGATTGTTCAAGAACGAGTTTGAGGGCCTGACATTTAGTATCAGTGAAGAGGGGAGGCCTAGGATCATTAGTGGGGAAGAAATGCTGAGAAATTCTTGGCAGATCGACGTTGAGAACTCAAAGTGGATCGATCTTTTAATCCTGGTAGGAATGGCAATTCTGTACAGAAGTCTGTTTATAGTTATCGTCAAGAGCATTGAGAAGGTGAAGCCTATAGTTGCAGCCTTCAACTTCAAGTGA 1944 0.4429 MMSCFLKPDHHGSSRRGQIVSLEMEERTEIAVAEEEEGIWLTWEDLSVTVSNGKDKSKPILQGLTGYAKPGQLLAIMGPSGCGKSTFLDALAGRLCAKAKQTGDILINGHKKALAYGTSAYLTQDDSILTTLTVGEAVHYSAQLQLPDSMTKSEKKERADFSIREMGLQDVINTRIGGCGGSKGISGGQKRRVSMCIEILTRPSLLFLDEPTSGLDSAASYYVMSRIASLNEKDGVQRTIIAAIHQPSSEVFQLFHDLCLLSSGQAVYFGPASAANEFFASNGFPCPTLRNPSDHFVKTINNDFEMEDPEQGLSEGLTTEETVNILVKSYESSAISHQVQTEVVKIRSRNSGAMELKRHASFLKQCIILTRRSFVNMYRDVGYYWLRLLVHGGLAITLGTIFYNIGSSESVQIRGSLLMFVATFLSFITICGFSSLVVDMKVFERERLNGHYGVAAYTIGHTFSCIPFLLLMSLIPGAIVYYLTGLHQGGQHFLYFASVLFISVMLVESFMMIVASMLPNFLMGMIAGAGVLGVMMLNGGFYRLPSELPRFLWRYPCYYISIHRYAYHGLFKNEFEGLTFSISEEGRPRIISGEEMLRNSWQIDVENSKWIDLLILVGMAILYRSLFIVIVKSIEKVKPIVAAFNFK 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0705 647 Pfam ABC transporter 62 213 IPR003439 GO:0005524
Prci3g0705 647 FunFam ABC transporter G family member 11 39 329 - -
Prci3g0705 647 Gene3D - 41 308 IPR027417 -
Prci3g0705 647 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 41 288 IPR003439 GO:0005524
Prci3g0705 647 ProSitePatterns ABC transporters family signature. 185 199 IPR017871 GO:0005524|GO:0016887
Prci3g0705 647 SMART AAA_5 70 260 IPR003593 GO:0016887
Prci3g0705 647 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 29 642 - -
Prci3g0705 647 Pfam ABC-2 type transporter 245 309 IPR043926 GO:0140359
Prci3g0705 647 Pfam ABC-2 type transporter 365 575 IPR013525 GO:0016020|GO:0140359
Prci3g0705 647 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 277 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0705 Prci-Chr3 9126373 9136893 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0705 57 273 Calmodulin-binding Proteins AT2G36910 24.229 1.37e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0705 K05681 - gmx:100789571 897.886