Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0703 ATGGCTTCCCATCTTCATCCACCTGTAGCACCAGATAATAGCTCTAAAGTTGTACAACTACAAACCAGTCTAGACTTTATCACTCCATTTGAGAACACAGCTATCAAGCCAACAGATAGCAGCAAAGGAACTCAGAGAGGGGATGGTGGGGTTTCAATGACATGGGAGGACTTGTGGGTGACCGTTGGAAGTGGAACGAATAAAAAGCCAATATTGCAGGGTCTGACTGGGTGTGCCAAACCAGGACAGCTTTTGGCTATAATGGGTCCTTCAGGATGCGGCAAAACCACACTCCTTGATGCTTTAGCAGGAAGATTGGGTTCAAACATGCAACAAACAGGGAAGATTCTGATCAACGGGCACAGACAAGCACTAGCATATGGAACATCAGCATATGTCACGCAAGATGATGCTATGTTGTCGACTTTAACAGCCGGAGAAGCTTTGTATTACTCATGCCAACTCCAACTTCCAGATTCCATGACCATGGAAGAGAAGAAGGACAGAGCAGACTCTACACTAAGAGAAATGGGTCTACAAGATGCCATCCATACAAGGATTGGGGGGTGGACTTTGAAAGGCCTTAGCAGCGGACAAAAGAGAAGACTAAGCATTTGCATTGAGATTATAACACGACCAAAACTTCTCTTCCTTGATGAACCAACTAGTGGGCTTGATAGTGCAGCTTCTTATTATGTTATGAGCAGAATTGCCAGTCTAAACATAAGGGACGGCGTTCAGAGAACAATTGTAGCCTCTATCCATCAGCCTAGCAGTGAAGTTTTTCAACTTTTCAATAACCTCTGTCTTCTGTCTTCTGGTGAAACAGTATATTTTGGCCCTGCATCAGTGGCAAATGAGTTCTTTGCTTCAAATGGCTTTCCTTGCCCAAGTCTCTACAATCCTTCTGATCATTTCTTAAAGATCATAAACAAGGATTTTGAACAGGATCCTGAAGAAGGCTTTGGTAAAAGTGTAACCACAGAAGAAGCGATTAATATCCTTGTAAAGTCCTACAAGTCATTTGAAATTTGCAAACAAATTCTGAAAGAAGTGGAAGAAATAAGCGAAAGTGATTCTGGTGCAATAGGGAAAAAGAGAATCCATGCTGCATTCCTTACTCAGTGCCTTATTCTTATAAGAAGATCTTCCCTGCATATGTACCGCGACATGAGCAATTACTGGTTACGTCTTGCTGTATATGTTGCAATAGCTATAAGTCTGGGTACTATATTCTATAGCATGGGCTCAAGTACTGAATCTGTTCAGGCCAGAGGATCGCTGCTTACATTTTTCATTTCAGTCCTTACTTTCATAACCCTTATTGGCGGATTCCCTCCATTTTTAGAGGAAATGAAGCTTCTTCCCCAATTTCATTATGGGGATGATCATTGTTGGTGGAATTCAAGGAGTCATGATATTACTTGGTGGTTTCTATAG 1440 0.4201 MASHLHPPVAPDNSSKVVQLQTSLDFITPFENTAIKPTDSSKGTQRGDGGVSMTWEDLWVTVGSGTNKKPILQGLTGCAKPGQLLAIMGPSGCGKTTLLDALAGRLGSNMQQTGKILINGHRQALAYGTSAYVTQDDAMLSTLTAGEALYYSCQLQLPDSMTMEEKKDRADSTLREMGLQDAIHTRIGGWTLKGLSSGQKRRLSICIEIITRPKLLFLDEPTSGLDSAASYYVMSRIASLNIRDGVQRTIVASIHQPSSEVFQLFNNLCLLSSGETVYFGPASVANEFFASNGFPCPSLYNPSDHFLKIINKDFEQDPEEGFGKSVTTEEAINILVKSYKSFEICKQILKEVEEISESDSGAIGKKRIHAAFLTQCLILIRRSSLHMYRDMSNYWLRLAVYVAIAISLGTIFYSMGSSTESVQARGSLLTFFISVLTFITLIGGFPPFLEEMKLLPQFHYGDDHCWWNSRSHDITWWFL 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0703 479 Gene3D - 53 299 IPR027417 -
Prci3g0703 479 Pfam ABC-2 type transporter 255 359 IPR043926 GO:0140359
Prci3g0703 479 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 53 298 IPR003439 GO:0005524
Prci3g0703 479 SMART AAA_5 81 275 IPR003593 GO:0016887
Prci3g0703 479 ProSitePatterns ABC transporters family signature. 195 209 IPR017871 GO:0005524|GO:0016887
Prci3g0703 479 Pfam ABC transporter 73 223 IPR003439 GO:0005524
Prci3g0703 479 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 283 IPR027417 -
Prci3g0703 479 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 44 454 - -
Prci3g0703 479 FunFam ABC transporter G family member 11 51 338 - -
Prci3g0703 479 Pfam ABC-2 type transporter 374 455 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0703 Prci-Chr3 9090496 9093644 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0703 71 233 Calmodulin-binding Proteins AT2G36910 28.000 6.99e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0703 K05681 - gmx:100790102 647.506