Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0701 ATGGTAGATTATTCATGTACTCCTGAAGAAGTGCAGCAGCATTTCCAATCATGTGGAACAGTAAACAGGGTCACCATTCGTACTGACAAGTTTGGCCAACCCAAGGGTTATGCCTATGTGGAGTTCCTTGAGGCAGAGGCTGTTCAGGAGGCACTTCTGCTGAATGAATCTGAGCTACATGGGCGTCAGTTGAAGGTAACAGCCAAGAGGACCAACATACCTGGGATGAAGCAGTATCGTCCCCGCCGGCCCAATCCTTTTATGGGGTTTCGAGGAAGGGCCCCATATGCACCTCCTTTTGCTTATTCGCCTTATGGATATGGGAAGGTTCCAAGGTTCAGAATGCCAATGCGTTATAGCCCCTACTATTGA 372 0.4866 MVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLEAEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNPFMGFRGRAPYAPPFAYSPYGYGKVPRFRMPMRYSPYY 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0701 123 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 65 IPR000504 GO:0003723
Prci3g0701 123 SUPERFAMILY RNA-binding domain, RBD 3 93 IPR035979 GO:0003676
Prci3g0701 123 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 2 87 - -
Prci3g0701 123 Gene3D - 1 75 IPR012677 -
Prci3g0701 123 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 1 71 IPR000504 GO:0003723
Prci3g0701 123 SMART rrm1_1 2 67 IPR000504 GO:0003723
Prci3g0701 123 CDD RRM_II_PABPs 2 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0701 Prci-Chr3 9077780 9081513 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0701 2 66 Eukaryotic Initiation Factors Gene Family AT2G23350 30.303 1.72e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0701 K14396 - mnt:21400190 226.098