Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0700 ATGGAAAATGACGACGTCGACATGCAAAGCGCCGATAACAATGAAGCAGAATTGGATGACATGAAGAAACGCTTGAAGGAGATGGAAGATGAAGCGGCTGCCCTGCGAGAAATGCAGGCCAAGGTGGAGAAGGAAATGGGCTCCGTGCAAGATCCCGCTAATGCTGCTGCAAGTCAGGCCAATAGAGAGGAAATAGATTCTCGGTCAGTCTTTGTAGGCAATGTAGATTATTCATGTACTCCTGAAGAAGTGCAGCAGCATTTCCAATCATGTGGAACAGTAAACAGGGTCACCATTCGTACTGACAAGTTTGGCCAACCCAAGGGTTATGCCTATGTGGAGTTCCTTGAGGCAGAGGCTGTTCAGGAGGCACTTCTGCTGAATGAATCTGAGCTACATGGGCGTCAGTTGAAGGTAACAGCCAAGAGGACCAACATACCTGGGATGAAGCAGTATCGTCCCCGCCGGCCCAATCCTTTTATGGGGTTTCGAGGAAGGGCCCCATATGCACCTCCTTTTGCTTATTCGCCTTATGGATATGGGAAGGTTCCAAGGTTCAGAATGCCAATGCGTTATAGCCCCTACTATTGA 591 0.489 MENDDVDMQSADNNEAELDDMKKRLKEMEDEAAALREMQAKVEKEMGSVQDPANAAASQANREEIDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLEAEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNPFMGFRGRAPYAPPFAYSPYGYGKVPRFRMPMRYSPYY 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0700 196 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 70 138 IPR000504 GO:0003723
Prci3g0700 196 SMART rrm1_1 69 140 IPR000504 GO:0003723
Prci3g0700 196 CDD RRM_II_PABPs 69 140 - -
Prci3g0700 196 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 68 144 IPR000504 GO:0003723
Prci3g0700 196 MobiDBLite consensus disorder prediction 43 63 - -
Prci3g0700 196 SUPERFAMILY RNA-binding domain, RBD 59 166 IPR035979 GO:0003676
Prci3g0700 196 Gene3D - 1 150 IPR012677 -
Prci3g0700 196 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 11 160 - -
Prci3g0700 196 MobiDBLite consensus disorder prediction 1 25 - -
Prci3g0700 196 Coils Coil 8 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0700 Prci-Chr3 9077780 9082712 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0700 69 139 Eukaryotic Initiation Factors Gene Family AT2G36660 31.944 4.23e-08 50.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g0700 3 9077780 9082712 Prci3g0700 3 9077780 9082712 CCT