Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0674 ATGATGCACATTGTTTTCGTCCACTACTTGGAAGTTAAGGGTCATAAGACAAGTGTTGGAGGAAAACCAGATATTGATGAGGTTTCATCAGATTCTCAAAGAGGCAGCTCTGCATCATCTGGTTTTTCGAGAGATTATAATACTGTGCCTTCAAGAAGTACGGATGCCATGAGCCCAACGAGCACTTTGACATCCTTATGTGAAGATGCTGACTCTGGTGATCATGGACAGTCATTGATTTCTGGAGCAAACTATGTTTTACAAGTTCAGGGAGATAAACTTAGAGGCATTGATGCTAGCACTTCTTTCAATGATGGCAAAAAAGCAAATGGAACGGGATTACGGGACAATAGCTTTGAACAATGTACAAATGGATTATCTACTGATCCATCCCTTGCATCATTTCCTTCTATCCCATCCAATTCAATAGGAAACATTCTTGAACCAGAAAATACTGTTCCAGCTGACGTTTTAGCCATGAAAAGTGTCCTCATAGGGCCAGATGGGAGTTCTCAGTCCCTCCAATCAAAGTGGCAGATCCCTTTTGAAAGTAATCCAGGACAGATGTGCAAAGGACTTACAACCCAATCGCTGGGTTTGGAATATGGATATGATTTTAGCAATGGTTTGCTGGAACATGAAACACATAATCCAAGACCTGATGTTGCTTCTGGTTCAGTAACTTTAGACTGTCAGCCGAAAAGGGAGCCCTTGCTGGAAAACTTTCCAGAACAGTATAACGATACTGAATCTCAAATTTCAATGAAATACAATTCTGGGAATGAAGTTCCCGCTGAAGAAAGTATTAATTATGCCTTGACTATGAGGCGTTCCTTGTTAGATGGGGAGGAAAGCCTAAAGAAAGTAGACAGCTTCTCTCGATGGATTACTAAAGAACTTGTAGAGGTGGATGATCTTCGTATGCAGTCATCACCTGGCATTTCCTGGAGCGCTGATGAATGTGGGCATGTGATAGATGATTCCTCGTTGAGCCCCTCCCTCTCACAGGACCAGCTGTTTAGCATAAATGATTTTTCACCTAACTGGGCTTATGCTGAATTGGAAACAGAGACAACTTATACATCTAAAACCACGCAGGTTTTGATAATTGGAACCTTTTTGAAGAGTCAAACAGAGGTAGCGAATTGTAACTGGTCGTGTATGTTTGGGGAAGTTGAGGTCCCTGCTGAGGTTCTGGCCAGTGGAATTTTGTGCTGTCAGGCTCCGCCTCTCAAGGTTGGACGGGTTCCCTTCTATGTAACATGCTCCAATAGGTTGGCTTGTAGTGAAGTGCGGGAATTTGATTACACAGAGAGCTTCGCTGAAAATGTTGATGTTTCAGATTTCTACAACAGTTCAACTGAAATACAGCTTCATCTGAGACTAGAGAAGCTACTTTCTTCAAAATCATCGCACCCTTTGAATTACAGCTTTGACAATGATGAGGTGAAAAGAAACTTAATGTTTGAGCTCATTACGCTAAAGGATGAAGAGGCGTTTTCAGACAGGGAAGAGCTGATGTCGGAGAAAAATGCGTCCCAGCAAAAAGTGAAGGAGTTAATATTCTACATGCAAGTTAAAGAGAAGCTGTACTCTTGGCTGCTTCACAAAGTAATTGAAGATGGTAAAGGGCCAAATGTTTTAGATGAAGAGGGGCAAGGCGCGCTTCATTTAGCAGCTGCTCTTGGTTATGATTGGGCAATAATGTCAATCGTTACTGCTGGAGTAAATATCAATTTTCGGGATGTAAATGGATGGACAGCTCTGCACTGGGCTGCATCCTATGGCAGGGAACGGACAGTCGCTGTACTTGTTGTTTCCATGGGTGCAAATGCTGGGGCATTGACAGATCCATGCCCAACGTTTCCCTCTGGTAGATCAGCAGCAGATCTTGCTTCTAGCAATGGGCACAAAGGAATCTCTGGTTTCCTTGCCGAGTCTTCATTAACCGGCCACCTTTCAACCCTCACAATGAATGATCAGAAGGAAGATGTTGGGCAAAGAGCTTCAGAAGTAGAAGTAGTACAGACAGTTTCAAAGCGAGCTGCAACACCAGGGTTTTGCGGTGATATGCCAGATGCTCTCTGCCTTAAGGATTCCCTTACCGCTGTCCGTAATGCTACACAGGCAGCTGATCGTATATACCAAGTGTTTAGAATGCAGTCGTTTCAGCGGAAACAGTTGACTCAGTTTGAAGATGATGAGTTTGGATTGTCAGATCAGCAAGCCCTGTCCCTTGTAGCTTCTAAGGCACGCAAGGCTGGGTATGGAGATGATTTAGCCCATACTGCTGCTGTACAAATACAGAAAAAGTTTCGTGGTTGGAAGAAAAGAAAAGAATTTCTAATAATTCGTCAAAGAATTGTTAAAATTCAGGCCCATGTGAGAGGTCACCAGGTAAGGAAGCAGCAGAAATCAGTCCTCTGGTCTGTAGGAATTTTGGAGAAGGTAATATTACGATGGAGACGAAAGGGCAGCGGTTTACGTGGCTTTCGACCGGATGCTAACAAAATCGCCAGCCAAGAAAATGTTGCCGTAAAAGAGGATGATTACGATTTTCTCAAGGAAGGAAGGAAACAAAGTGAAGAACGGTTCCAAAAGGCACTTTCGAGGGTGAAGTCTATGGTTCAGTATCCAGAAGCACGAGCTCAGTACCGGCGTCTCCTAAATGTTGTCGAGGACTTCCGGCGAACCAAGGCAAGCGATATGGATGTGATCAATTCAGAAGAGACAGTGGATGGTGTAGAGGACCTTATTGATATTAACATGCTCTTAGATGATGACAATTTCATACCTATAGCATTTGATTGA 2811 0.4329 MMHIVFVHYLEVKGHKTSVGGKPDIDEVSSDSQRGSSASSGFSRDYNTVPSRSTDAMSPTSTLTSLCEDADSGDHGQSLISGANYVLQVQGDKLRGIDASTSFNDGKKANGTGLRDNSFEQCTNGLSTDPSLASFPSIPSNSIGNILEPENTVPADVLAMKSVLIGPDGSSQSLQSKWQIPFESNPGQMCKGLTTQSLGLEYGYDFSNGLLEHETHNPRPDVASGSVTLDCQPKREPLLENFPEQYNDTESQISMKYNSGNEVPAEESINYALTMRRSLLDGEESLKKVDSFSRWITKELVEVDDLRMQSSPGISWSADECGHVIDDSSLSPSLSQDQLFSINDFSPNWAYAELETETTYTSKTTQVLIIGTFLKSQTEVANCNWSCMFGEVEVPAEVLASGILCCQAPPLKVGRVPFYVTCSNRLACSEVREFDYTESFAENVDVSDFYNSSTEIQLHLRLEKLLSSKSSHPLNYSFDNDEVKRNLMFELITLKDEEAFSDREELMSEKNASQQKVKELIFYMQVKEKLYSWLLHKVIEDGKGPNVLDEEGQGALHLAAALGYDWAIMSIVTAGVNINFRDVNGWTALHWAASYGRERTVAVLVVSMGANAGALTDPCPTFPSGRSAADLASSNGHKGISGFLAESSLTGHLSTLTMNDQKEDVGQRASEVEVVQTVSKRAATPGFCGDMPDALCLKDSLTAVRNATQAADRIYQVFRMQSFQRKQLTQFEDDEFGLSDQQALSLVASKARKAGYGDDLAHTAAVQIQKKFRGWKKRKEFLIIRQRIVKIQAHVRGHQVRKQQKSVLWSVGILEKVILRWRRKGSGLRGFRPDANKIASQENVAVKEDDYDFLKEGRKQSEERFQKALSRVKSMVQYPEARAQYRRLLNVVEDFRRTKASDMDVINSEETVDGVEDLIDINMLLDDDNFIPIAFD 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0674 936 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 758 810 IPR027417 -
Prci3g0674 936 Pfam IQ calmodulin-binding motif 786 803 IPR000048 GO:0005515
Prci3g0674 936 Pfam IQ calmodulin-binding motif 763 781 IPR000048 GO:0005515
Prci3g0674 936 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 1 898 - -
Prci3g0674 936 FunFam Calmodulin-binding transcription activator 2 760 808 - -
Prci3g0674 936 ProSiteProfiles Ankyrin repeat region circular profile. 584 611 - -
Prci3g0674 936 ProSiteProfiles Ankyrin repeat profile. 551 583 IPR002110 GO:0005515
Prci3g0674 936 ProSiteProfiles IQ motif profile. 761 790 IPR000048 GO:0005515
Prci3g0674 936 ProSiteProfiles IQ motif profile. 784 808 IPR000048 GO:0005515
Prci3g0674 936 SUPERFAMILY Ankyrin repeat 535 646 IPR036770 -
Prci3g0674 936 Gene3D Immunoglobulins 335 440 IPR013783 -
Prci3g0674 936 ProSiteProfiles Ankyrin repeat profile. 584 617 IPR002110 GO:0005515
Prci3g0674 936 MobiDBLite consensus disorder prediction 30 68 - -
Prci3g0674 936 Gene3D - 759 807 - -
Prci3g0674 936 SMART iq_5 783 805 IPR000048 GO:0005515
Prci3g0674 936 SMART iq_5 760 782 IPR000048 GO:0005515
Prci3g0674 936 Gene3D - 517 704 IPR036770 -
Prci3g0674 936 MobiDBLite consensus disorder prediction 17 73 - -
Prci3g0674 936 Pfam IPT/TIG domain 356 429 IPR002909 -
Prci3g0674 936 FunFam Calmodulin-binding transcription activator 2 335 440 - -
Prci3g0674 936 Pfam Ankyrin repeats (3 copies) 533 611 IPR002110 GO:0005515
Prci3g0674 936 SUPERFAMILY E set domains 358 436 IPR014756 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0674 Prci-Chr3 8566689 8575978 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0674 1 917 CAMTA Transcription Factor Family AT5G64220 48.428 0.0 782
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0674 K21596 - gmx:100795682 1164.83