Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0673 ATGGCGGAGCGTGATTCTTTCGGGCTGGGTCCTCGATTAGATATTCAGCAATTACAATTTGAAGCCCAGCATCGTTGGCTGCGGCCTGCTGAAATTTGTGAAATTCTTCGTAATTATCAGATGTTTCATATCACATCAGAACCTCCAAACATGCCACCGAGTGGTTCACTTTTTCTTTTTGATAGGAAGGTATTGAGATATTTTAGAAAGGATGGACATAATTGGAGAAAGAAAAAAGATGGAAAGACTGTGAAGGAAGCTCATGAAAAGTTGAAGGTGGGAAGTGTTGATGTACTACATTGCTACTATGCTCATGGAGAAGAAAATGAAAATTTCCAGAGGCGAAGCTATTGGTTGCTTGAACAGGATATGATGCACATTGTTTTCGTCCACTACTTGGAAGTTAAGGGTCATAAGACAAGTGTTGGAGGAAAACCAGATATTGATGAGGTTTCATCAGATTCTCAAAGAGGCAGCTCTGCATCATCTGGTTTTTCGAGAGATTATAATACTGTGCCTTCAAGAAGTACGGATGCCATGAGCCCAACGAGCACTTTGACATCCTTATGTGAAGATGCTGACTCTGGTGATCATGGACAGTCATTGATTTCTGGAGCAAACTATGTTTTACAAGTTCAGGGAGATAAACTTAGAGGCATTGATGCTAGCACTTCTTTCAATGATGGCAAAAAAGCAAATGGAACGGGATTACGGGACAATAGCTTTGAACAATGTACAAATGGATTATCTACTGATCCATCCCTTGCATCATTTCCTTCTATCCCATCCAATTCAATAGGAAACATTCTTGAACCAGAAAATACTGTTCCAGCTGACGTTTTAGCCATGAAAAGTGTCCTCATAGGGCCAGATGGGAGTTCTCAGTCCCTCCAATCAAAGTGGCAGATCCCTTTTGAAAGTAATCCAGGACAGATGTGCAAAGGACTTACAACCCAATCGCTGGGTTTGGAATATGGATATGATTTTAGCAATGGTTTGCTGGAACATGAAACACATAATCCAAGACCTGATGTTGCTTCTGGTTCAGTAACTTTAGACTGTCAGCCGAAAAGGGAGCCCTTGCTGGAAAACTTTCCAGAACAGTATAACGATACTGAATCTCAAATTTCAATGAAATACAATTCTGGGAATGAAGTTCCCGCTGAAGAAAGTATTAATTATGCCTTGACTATGAGGCGTTCCTTGTTAGATGGGGAGGAAAGCCTAAAGAAAGTAGACAGCTTCTCTCGATGGATTACTAAAGAACTTGTAGAGGTGGATGATCTTCGTATGCAGTCATCACCTGGCATTTCCTGGAGCGCTGATGAATGTGGGCATGTGATAGATGATTCCTCGTTGAGCCCCTCCCTCTCACAGGACCAGCTGTTTAGCATAAATGATTTTTCACCTAACTGGGCTTATGCTGAATTGGAAACAGAGGTTTTGATAATTGGAACCTTTTTGAAGAGTCAAACAGAGGTAGCGAATTGTAACTGGTCGTGTATGTTTGGGGAAGTTGAGGTCCCTGCTGAGGTTCTGGCCAGTGGAATTTTGTGCTGTCAGGCTCCGCCTCTCAAGGTTGGACGGGTTCCCTTCTATGTAACATGCTCCAATAGGTTGGCTTGTAGTGAAGTGCGGGAATTTGATTACACAGAGAGCTTCGCTGAAAATGTTGATGTTTCAGATTTCTACAACAGTTCAACTGAAATACAGCTTCATCTGAGACTAGAGAAGCTACTTTCTTCAAAATCATCGCACCCTTTGAATTACAGCTTTGACAATGATGAGGTGAAAAGAAACTTAATGTTTGAGCTCATTACGCTAAAGGATGAAGAGGCGTTTTCAGACAGGGAAGAGCTGATGTCGGAGAAAAATGCGTCCCAGCAAAAAGTGAAGGAGTTAATATTCTACATGCAAGTTAAAGAGAAGCTGTACTCTTGGCTGCTTCACAAAGTAATTGAAGATGGTAAAGGGCCAAATGTTTTAGATGAAGAGGGGCAAGGCGCGCTTCATTTAGCAGCTGCTCTTGGTTATGATTGGGCAATAATGTCAATCGTTACTGCTGGAGTAAATATCAATTTTCGGGATGTAAATGGATGGACAGCTCTGCACTGGGCTGCATCCTATGGCAGGGAACGGACAGTCGCTGTACTTGTTGTTTCCATGGGTGCAAATGCTGGGGCATTGACAGATCCATGCCCAACGTTTCCCTCTGGTAGATCAGCAGCAGATCTTGCTTCTAGCAATGGGCACAAAGGAATCTCTGGTTTCCTTGCCGAGTCTTCATTAACCGGCCACCTTTCAACCCTCACAATGAATGATCAGAAGGAAGATGTTGGGCAAAGAGCTTCAGAAGTAGAAGTAGTACAGACAGTTTCAAAGCGAGCTGCAACACCAGGGTTTTGCGGTGATATGCCAGATGCTCTCTGCCTTAAGGATTCCCTTACCGCTGTCCGTAATGCTACACAGGCAGCTGATCGTATATACCAAGTGTTTAGAATGCAGTCGTTTCAGCGGAAACAGTTGACTCAGTTTGAAGATGATGAGTTTGGATTGTCAGATCAGCAAGCCCTGTCCCTTGTAGCTTCTAAGGCACGCAAGGCTGGGTATGGAGATGATTTAGCCCATACTGCTGCTGTACAAATACAGAAAAAGTTTCGTGGTTGGAAGAAAAGAAAAGAATTTCTAATAATTCGTCAAAGAATTGTTAAAATTCAGGCCCATGTGAGAGGTCACCAGGTAAGGAAGCAGCAGAAATCAGTCCTCTGGTCTGTAGGAATTTTGGAGAAGGTAATATTACGATGGAGACGAAAGGGCAGCGGTTTACGTGGCTTTCGACCGGATGCTAACAAAATCGCCAGCCAAGAAAATGTTGCCGTAAAAGAGGATGATTACGATTTTCTCAAGGAAGGAAGGAAACAAAGTGAAGAACGGTTCCAAAAGGCACTTTCGAGGGTGAAGTCTATGGTTCAGTATCCAGAAGCACGAGCTCAGTACCGGCGTCTCCTAAATGTTGTCGAGGACTTCCGGCGAACCAAGGCAAGCGATATGGATGTGATCAATTCAGAAGAGACAGTGGATGGTGTAGAGGACCTTATTGATATTAACATGCTCTTAGATGATGACAATTTCATACCTATAGCATTTGATTGA 3153 0.4301 MAERDSFGLGPRLDIQQLQFEAQHRWLRPAEICEILRNYQMFHITSEPPNMPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWLLEQDMMHIVFVHYLEVKGHKTSVGGKPDIDEVSSDSQRGSSASSGFSRDYNTVPSRSTDAMSPTSTLTSLCEDADSGDHGQSLISGANYVLQVQGDKLRGIDASTSFNDGKKANGTGLRDNSFEQCTNGLSTDPSLASFPSIPSNSIGNILEPENTVPADVLAMKSVLIGPDGSSQSLQSKWQIPFESNPGQMCKGLTTQSLGLEYGYDFSNGLLEHETHNPRPDVASGSVTLDCQPKREPLLENFPEQYNDTESQISMKYNSGNEVPAEESINYALTMRRSLLDGEESLKKVDSFSRWITKELVEVDDLRMQSSPGISWSADECGHVIDDSSLSPSLSQDQLFSINDFSPNWAYAELETEVLIIGTFLKSQTEVANCNWSCMFGEVEVPAEVLASGILCCQAPPLKVGRVPFYVTCSNRLACSEVREFDYTESFAENVDVSDFYNSSTEIQLHLRLEKLLSSKSSHPLNYSFDNDEVKRNLMFELITLKDEEAFSDREELMSEKNASQQKVKELIFYMQVKEKLYSWLLHKVIEDGKGPNVLDEEGQGALHLAAALGYDWAIMSIVTAGVNINFRDVNGWTALHWAASYGRERTVAVLVVSMGANAGALTDPCPTFPSGRSAADLASSNGHKGISGFLAESSLTGHLSTLTMNDQKEDVGQRASEVEVVQTVSKRAATPGFCGDMPDALCLKDSLTAVRNATQAADRIYQVFRMQSFQRKQLTQFEDDEFGLSDQQALSLVASKARKAGYGDDLAHTAAVQIQKKFRGWKKRKEFLIIRQRIVKIQAHVRGHQVRKQQKSVLWSVGILEKVILRWRRKGSGLRGFRPDANKIASQENVAVKEDDYDFLKEGRKQSEERFQKALSRVKSMVQYPEARAQYRRLLNVVEDFRRTKASDMDVINSEETVDGVEDLIDINMLLDDDNFIPIAFD 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0673 1050 Gene3D - 632 817 IPR036770 -
Prci3g0673 1050 Pfam Ankyrin repeats (3 copies) 647 725 IPR002110 GO:0005515
Prci3g0673 1050 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 872 924 IPR027417 -
Prci3g0673 1050 SUPERFAMILY Ankyrin repeat 649 760 IPR036770 -
Prci3g0673 1050 Gene3D - 873 921 - -
Prci3g0673 1050 ProSiteProfiles IQ motif profile. 875 904 IPR000048 GO:0005515
Prci3g0673 1050 ProSiteProfiles IQ motif profile. 898 922 IPR000048 GO:0005515
Prci3g0673 1050 SUPERFAMILY E set domains 465 550 IPR014756 -
Prci3g0673 1050 ProSiteProfiles Ankyrin repeat profile. 665 697 IPR002110 GO:0005515
Prci3g0673 1050 SMART iq_5 874 896 IPR000048 GO:0005515
Prci3g0673 1050 SMART iq_5 897 919 IPR000048 GO:0005515
Prci3g0673 1050 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Prci3g0673 1050 ProSiteProfiles Ankyrin repeat region circular profile. 698 725 - -
Prci3g0673 1050 FunFam Calmodulin-binding transcription activator 2 874 922 - -
Prci3g0673 1050 MobiDBLite consensus disorder prediction 143 185 - -
Prci3g0673 1050 ProSiteProfiles Ankyrin repeat profile. 698 731 IPR002110 GO:0005515
Prci3g0673 1050 Pfam IPT/TIG domain 465 543 IPR002909 -
Prci3g0673 1050 Gene3D Immunoglobulins 458 554 IPR013783 -
Prci3g0673 1050 SMART CG_1_2 18 136 IPR005559 GO:0003677
Prci3g0673 1050 Pfam IQ calmodulin-binding motif 900 917 IPR000048 GO:0005515
Prci3g0673 1050 Pfam IQ calmodulin-binding motif 877 895 IPR000048 GO:0005515
Prci3g0673 1050 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 14 1012 - -
Prci3g0673 1050 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Prci3g0673 1050 MobiDBLite consensus disorder prediction 153 185 - -
Prci3g0673 1050 FunFam Calmodulin-binding transcription activator 2 458 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0673 Prci-Chr3 8564393 8575978 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0673 1 1031 CAMTA Transcription Factor Family AT5G64220 53.427 0.0 1029
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Prci3g0673 CG-1 7.2e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0673 K21596 - gmx:100795682 1428.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g0673 3 8564393 8575978 Prci3g0673 3 8564393 8575978 CCT