Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0672 ATGGCGGAGCGTGATTCTTTCGGGCTGGGTCCTCGATTAGATATTCAGCAATTACAATTTGAAGCCCAGCATCGTTGGCTGCGGCCTGCTGAAATTTGTGAAATTCTTCGTAATTATCAGATGTTTCATATCACATCAGAACCTCCAAACATGCCACCGAGTGGTTCACTTTTTCTTTTTGATAGGAAGGTATTGAGATATTTTAGAAAGGATGGACATAATTGGAGAAAGAAAAAAGATGGAAAGACTGTGAAGGAAGCTCATGAAAAGTTGAAGGTGGGAAGTGTTGATGTACTACATTGCTACTATGCTCATGGAGAAGAAAATGAAAATTTCCAGAGGCGAAGCTATTGGTTGCTTGAACAGGATATGATGCACATTGTTTTCGTCCACTACTTGGAAGTTAAGGGTCATAAGACAAGTGTTGGAGGAAAACCAGATATTGATGAGGTTTCATCAGATTCTCAAAGAGGCAGCTCTGCATCATCTGGTTTTTCGAGAGATTATAATACTGTGCCTTCAAGAAGTACGGATGCCATGAGCCCAACGAGCACTTTGACATCCTTATGTGAAGATGCTGACTCTGGTGATCATGGACAGTCATTGATTTCTGGAGCAAACTATGTTTTACAAGTTCAGGGAGATAAACTTAGAGGCATTGATGCTAGCACTTCTTTCAATGATGGCAAAAAAGCAAATGGAACGGGATTACGGGACAATAGCTTTGAACAATGTACAAATGGATTATCTACTGATCCATCCCTTGCATCATTTCCTTCTATCCCATCCAATTCAATAGGAAACATTCTTGAACCAGAAAATACTGTTCCAGCTGACGTTTTAGCCATGAAAAGTGTCCTCATAGGGCCAGATGGGAGTTCTCAGTCCCTCCAATCAAAGTGGCAGATCCCTTTTGAAAGTAATCCAGGACAGATGTGCAAAGGACTTACAACCCAATCGCTGGGTTTGGAATATGGATATGATTTTAGCAATGGTTTGCTGGAACATGAAACACATAATCCAAGACCTGATGTTGCTTCTGGTTCAGTAACTTTAGACTGTCAGCCGAAAAGGGAGCCCTTGCTGGAAAACTTTCCAGAACAGTATAACGATACTGAATCTCAAATTTCAATGAAATACAATTCTGGGAATGAAGTTCCCGCTGAAGAAAGTATTAATTATGCCTTGACTATGAGGCGTTCCTTGTTAGATGGGGAGGAAAGCCTAAAGAAAGTAGACAGCTTCTCTCGATGGATTACTAAAGAACTTGTAGAGGTGGATGATCTTCGTATGCAGTCATCACCTGGCATTTCCTGGAGCGCTGATGAATGTGGGCATGTGATAGATGATTCCTCGTTGAGCCCCTCCCTCTCACAGGACCAGCTGTTTAGCATAAATGATTTTTCACCTAACTGGGCTTATGCTGAATTGGAAACAGAGACAACTTATACATCTAAAACCACGCAGGTTTTGATAATTGGAACCTTTTTGAAGAGTCAAACAGAGGTAGCGAATTGTAACTGGTCGTGTATGTTTGGGGAAGTTGAGGTCCCTGCTGAGGTTCTGGCCAGTGGAATTTTGTGCTGTCAGGCTCCGCCTCTCAAGGTTGGACGGGTTCCCTTCTATGTAACATGCTCCAATAGGTTGGCTTGTAGTGAAGTGCGGGAATTTGATTACACAGAGAGCTTCGCTGAAAATGTTGATGTTTCAGATTTCTACAACAGTTCAACTGAAATACAGCTTCATCTGAGACTAGAGAAGCTACTTTCTTCAAAATCATCGCACCCTTTGAATTACAGCTTTGACAATGATGAGGTGAAAAGAAACTTAATGTTTGAGCTCATTACGCTAAAGGATGAAGAGGCGTTTTCAGACAGGGAAGAGCTGATGTCGGAGAAAAATGCGTCCCAGCAAAAAGTGAAGGAGTTAATATTCTACATGCAAGTTAAAGAGAAGCTGTACTCTTGGCTGCTTCACAAAGTAATTGAAGATGGTAAAGGGCCAAATGTTTTAGATGAAGAGGGGCAAGGCGCGCTTCATTTAGCAGCTGCTCTTGGTTATGATTGGGCAATAATGTCAATCGTTACTGCTGGAGTAAATATCAATTTTCGGGATGTAAATGGATGGACAGCTCTGCACTGGGCTGCATCCTATGGCAGGGAACGGACAGTCGCTGTACTTGTTGTTTCCATGGGTGCAAATGCTGGGGCATTGACAGATCCATGCCCAACGTTTCCCTCTGGTAGATCAGCAGCAGATCTTGCTTCTAGCAATGGGCACAAAGGAATCTCTGGTTTCCTTGCCGAGTCTTCATTAACCGGCCACCTTTCAACCCTCACAATGAATGATCAGAAGGAAGATGTTGGGCAAAGAGCTTCAGAAGTAGAAGTAGTACAGACAGTTTCAAAGCGAGCTGCAACACCAGGGTTTTGCGGTGATATGCCAGATGCTCTCTGCCTTAAGGATTCCCTTACCGCTGTCCGTAATGCTACACAGGCAGCTGATCGTATATACCAAGTGTTTAGAATGCAGTCGTTTCAGCGGAAACAGTTGACTCAGTTTGAAGATGATGAGTTTGGATTGTCAGATCAGCAAGCCCTGTCCCTTGTAGCTTCTAAGGCACGCAAGGCTGGGTATGGAGATGATTTAGCCCATACTGCTGCTGTACAAATACAGAAAAAGTTTCGTGGTTGGAAGAAAAGAAAAGAATTTCTAATAATTCGTCAAAGAATTGTTAAAATTCAGGCCCATGTGAGAGGTCACCAGGTAAGGAAGCAGCAGAAATCAGTCCTCTGGTCTGTAGGAATTTTGGAGAAGGTAATATTACGATGGAGACGAAAGGGCAGCGGTTTACGTGGCTTTCGACCGGATGCTAACAAAATCGCCAGCCAAGAAAATGTTGCCGTAAAAGAGGATGATTACGATTTTCTCAAGGAAGGAAGGAAACAAAGTGAAGAACGGTTCCAAAAGGCACTTTCGAGGGTGAAGTCTATGGTTCAGTATCCAGAAGCACGAGCTCAGTACCGGCGTCTCCTAAATGTTGTCGAGGACTTCCGGCGAACCAAGGCAAGCGATATGGATGTGATCAATTCAGAAGAGACAGTGGATGGTGTAGAGGACCTTATTGATATTAACATGCTCTTAGATGATGACAATTTCATACCTATAGCATTTGATTGA 3180 0.4296 MAERDSFGLGPRLDIQQLQFEAQHRWLRPAEICEILRNYQMFHITSEPPNMPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWLLEQDMMHIVFVHYLEVKGHKTSVGGKPDIDEVSSDSQRGSSASSGFSRDYNTVPSRSTDAMSPTSTLTSLCEDADSGDHGQSLISGANYVLQVQGDKLRGIDASTSFNDGKKANGTGLRDNSFEQCTNGLSTDPSLASFPSIPSNSIGNILEPENTVPADVLAMKSVLIGPDGSSQSLQSKWQIPFESNPGQMCKGLTTQSLGLEYGYDFSNGLLEHETHNPRPDVASGSVTLDCQPKREPLLENFPEQYNDTESQISMKYNSGNEVPAEESINYALTMRRSLLDGEESLKKVDSFSRWITKELVEVDDLRMQSSPGISWSADECGHVIDDSSLSPSLSQDQLFSINDFSPNWAYAELETETTYTSKTTQVLIIGTFLKSQTEVANCNWSCMFGEVEVPAEVLASGILCCQAPPLKVGRVPFYVTCSNRLACSEVREFDYTESFAENVDVSDFYNSSTEIQLHLRLEKLLSSKSSHPLNYSFDNDEVKRNLMFELITLKDEEAFSDREELMSEKNASQQKVKELIFYMQVKEKLYSWLLHKVIEDGKGPNVLDEEGQGALHLAAALGYDWAIMSIVTAGVNINFRDVNGWTALHWAASYGRERTVAVLVVSMGANAGALTDPCPTFPSGRSAADLASSNGHKGISGFLAESSLTGHLSTLTMNDQKEDVGQRASEVEVVQTVSKRAATPGFCGDMPDALCLKDSLTAVRNATQAADRIYQVFRMQSFQRKQLTQFEDDEFGLSDQQALSLVASKARKAGYGDDLAHTAAVQIQKKFRGWKKRKEFLIIRQRIVKIQAHVRGHQVRKQQKSVLWSVGILEKVILRWRRKGSGLRGFRPDANKIASQENVAVKEDDYDFLKEGRKQSEERFQKALSRVKSMVQYPEARAQYRRLLNVVEDFRRTKASDMDVINSEETVDGVEDLIDINMLLDDDNFIPIAFD 1059
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0672 1059 SUPERFAMILY E set domains 481 559 IPR014756 -
Prci3g0672 1059 ProSiteProfiles IQ motif profile. 884 913 IPR000048 GO:0005515
Prci3g0672 1059 Pfam IPT/TIG domain 479 552 IPR002909 -
Prci3g0672 1059 Gene3D Immunoglobulins 458 563 IPR013783 -
Prci3g0672 1059 FunFam Calmodulin-binding transcription activator 2 883 931 - -
Prci3g0672 1059 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Prci3g0672 1059 Gene3D - 641 826 IPR036770 -
Prci3g0672 1059 ProSiteProfiles Ankyrin repeat profile. 707 740 IPR002110 GO:0005515
Prci3g0672 1059 MobiDBLite consensus disorder prediction 143 185 - -
Prci3g0672 1059 SUPERFAMILY Ankyrin repeat 658 769 IPR036770 -
Prci3g0672 1059 ProSiteProfiles Ankyrin repeat region circular profile. 707 734 - -
Prci3g0672 1059 SMART CG_1_2 18 136 IPR005559 GO:0003677
Prci3g0672 1059 ProSiteProfiles Ankyrin repeat profile. 674 706 IPR002110 GO:0005515
Prci3g0672 1059 ProSiteProfiles IQ motif profile. 907 931 IPR000048 GO:0005515
Prci3g0672 1059 SMART iq_5 906 928 IPR000048 GO:0005515
Prci3g0672 1059 SMART iq_5 883 905 IPR000048 GO:0005515
Prci3g0672 1059 Pfam IQ calmodulin-binding motif 909 926 IPR000048 GO:0005515
Prci3g0672 1059 Pfam IQ calmodulin-binding motif 886 904 IPR000048 GO:0005515
Prci3g0672 1059 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Prci3g0672 1059 Pfam Ankyrin repeats (3 copies) 656 734 IPR002110 GO:0005515
Prci3g0672 1059 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 14 1021 - -
Prci3g0672 1059 FunFam Calmodulin-binding transcription activator 2 458 563 - -
Prci3g0672 1059 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 881 933 IPR027417 -
Prci3g0672 1059 MobiDBLite consensus disorder prediction 153 185 - -
Prci3g0672 1059 Gene3D - 882 930 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0672 Prci-Chr3 8564393 8575978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0672 1 1040 CAMTA Transcription Factor Family AT5G64220 52.980 0.0 1024
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Prci3g0672 CG-1 7.3e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0672 K21596 - gmx:100795682 1408.28