Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0665 ATGCTTCGTGAAAGTTCTGCATTGGCCCCCACAAACCCTAGCCTAATCTTATATTCCCTTCTTTCACCCTCACGGTCCTCTGCGCTCGAAGCTTCAACAATGTCTCACTTTGGAAGGTCGGGTCCTCCAGACATCACTGACACCTATTCGCTTCTAGTGCTCAATATCACATTCCGTACAACCGCAGATGATCTGTTTCCCCTGTTCGATAAGTACGGCAAGGTCGTCGACATCTTTATTCCCAGAGATCGAAGGACCGGTGAATCAAGGGGTTTTGCATTCGTGCGTTATAAGTATGCTGATGAGGCACAAAAGGCTGTGGATAGGCTGGACGGAAGAGTGGTTGATGGCCGGGAGATAACTGTTCAATTTGCAAAATATGGGCCTAATGCAGAGAGGATTCACAAAGGAAGGATTATTGAAACATTCCCCAAGTCTAGGCACAGGTCAAGGAGTCGCAGCCCCAGGAGAAGGTATCGTGATGATTACAGGGACAGGGATTATAGGAGGAGGAGTCGCAGCAGGAGTTACGATAGGTATGAAAGGGATAGGTATCGTGGAAGAGAAAGAGAATCTCGTCGCAGAAGTAGGAGCCGTAGTGCAAGTCCTGATTACTACAAGAGTCGTGGAAGGGATCGCTATGATGATGAGCGTCGTAGCCATAGCCGAAGCCGAAGCCGATCTGTGGATAGTCGCTCCCCTGCACGCCGCAGCCTTAGTCCTCGAAGGAGTCCTTCACCTCAAAGGAGTGCTTCCCCTCAAAGAAGTATTTCCCCAAGGAGGAGCCCAAGGGATGAAAGCCCTGAGAGTCGTAGCCGTGATGGACGATCTCCTACACCTCACAGTGTCTCACCACGTGGTCAACCCAAGGATTCGAGAAGCCCATCCCCTCGAAATTCTAATGGAGATGAATGA 915 0.5016 MLRESSALAPTNPSLILYSLLSPSRSSALEASTMSHFGRSGPPDITDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEAQKAVDRLDGRVVDGREITVQFAKYGPNAERIHKGRIIETFPKSRHRSRSRSPRRRYRDDYRDRDYRRRSRSRSYDRYERDRYRGRERESRRRSRSRSASPDYYKSRGRDRYDDERRSHSRSRSRSVDSRSPARRSLSPRRSPSPQRSASPQRSISPRRSPRDESPESRSRDGRSPTPHSVSPRGQPKDSRSPSPRNSNGDE 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0665 304 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN RZ1A 47 280 - -
Prci3g0665 304 MobiDBLite consensus disorder prediction 259 276 - -
Prci3g0665 304 FunFam Serine/arginine-rich splicing factor SC35 37 136 - -
Prci3g0665 304 SMART rrm2_1 50 123 IPR003954 GO:0003676
Prci3g0665 304 SMART rrm1_1 50 123 IPR000504 GO:0003723
Prci3g0665 304 Gene3D - 22 136 IPR012677 -
Prci3g0665 304 SUPERFAMILY RNA-binding domain, RBD 40 134 IPR035979 GO:0003676
Prci3g0665 304 CDD RRM_SRSF2_SRSF8 51 123 - -
Prci3g0665 304 MobiDBLite consensus disorder prediction 136 304 - -
Prci3g0665 304 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 51 121 IPR000504 GO:0003723
Prci3g0665 304 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 49 127 IPR000504 GO:0003723
Prci3g0665 304 MobiDBLite consensus disorder prediction 277 304 - -
Prci3g0665 304 MobiDBLite consensus disorder prediction 156 232 - -
Prci3g0665 304 MobiDBLite consensus disorder prediction 233 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0665 Prci-Chr3 8427771 8431294 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0665 47 125 Eukaryotic Initiation Factors Gene Family AT3G11400 35.443 9.18e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0665 K12891 - gmx:100778928 267.7