Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0635 ATGGCAGGTGCTGCAACATCTGGAGCTGTATTGAATGGCTTGGGATCTTCCTTCTTGTGTGGAGGAAAGAGAAGCCAATCTCTCTTCGCTGCTAAATCTGGTTCTGCTAATAATAATGCTGCAAACCCTAAGAGGTTCTTTGTTGCTGCTGCTGCTGCTGCACCTAAGAAATCTTGGATTCCTGGTGTTAGAGGTGGTGGCAACTTCATCGACCCTGAATGGCTAGATGGCTCGCTCCCTGGTGACTATGGCTTTGACCCTCTTGGACTAGGCAAGGATCCAGCATTCCTCAAGTGGTACAGAGAAGCAGAGCTCATCCATGGCCGGTGGGCAATGGCGGCGGTTGTCGGCATCTTTGTCGGCCAGGCATGGAGTGGAGTGCCGTGGTTCGAGGCCGGAGCCGACCCTGGCGCCATTGCTCCGTTCTCCTTCGGCTCACTTCTGGGCACACAATTGCTGCTCATGGGGTGGGTAGAAAGCAAAAGGTGGGTGGACTTCTTCAACCCTGATTCACAGTCAGTGGATTGGGCCACGCCGTGGTCGAGAACCGCCGAGAACTTCGCTAACTCCACCGGCGACCAGGGATATCCCGGCGGCAAGTTCTTTGACCCATTGGGATTCGCAGGGAAAATCCAGGATGGGGTTTACATTCCTGACAGAGAAAAGCTTGAAAGACTGAAACTTGCTGAGATCAAGCATGCTAGGATTGCTATGTTGGCTATGCTGATCTTCTACTTTGAAGCAGGACAAGGGAAGACACCTCTCGGTGCTCTTGGCTTGTAA 783 0.5275 MAGAATSGAVLNGLGSSFLCGGKRSQSLFAAKSGSANNNAANPKRFFVAAAAAAPKKSWIPGVRGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWSGVPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVDWATPWSRTAENFANSTGDQGYPGGKFFDPLGFAGKIQDGVYIPDREKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGALGL 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0635 260 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 53 258 IPR001344 GO:0009765|GO:0016020
Prci3g0635 260 Pfam Chlorophyll A-B binding protein 72 248 IPR022796 -
Prci3g0635 260 SUPERFAMILY Chlorophyll a-b binding protein 71 260 - -
Prci3g0635 260 Gene3D Chlorophyll a/b binding protein domain 72 259 - -
Prci3g0635 260 FunFam Chlorophyll a-b binding protein, chloroplastic 72 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0635 Prci-Chr3 8210379 8212010 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0635 5 260 Chloroplast and Mitochondria Gene Families AT1G15820 82.812 6.86e-153 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0635 K08917 - jre:109007089 458.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g0635 3 8210379 8212010 Prci3g0635 3 8210379 8212010 CCT
Prci3g0635 3 8210379 8212010 Prci3g0635 3 8210379 8212010 ECH