Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0628 ATGGGTGTGGTGGTGGCATTACTATTATGCTACACTTCTATTACTAGTGCATCTACTACCTTGATGAAAGCAGAGGAGAAACATGCTTTGCTTCAAACCAACTGGTGGAATCTTAGTATTACTCCCTACAAATTCTCTGACCCTTGTGATTGGCCAGAGATATATTGCAATGAGTTTGGAAGCGTTGTTGAGATGTATTCACCCCAAATCACTTCACAGCACCCTCGACTAGTAGATCTCAACTTGACAGCATTTTCTTATTTAGAAGAACTTAAGCTTTCAGGAATGGGTTTGACAGGCATGATACCAGTTCAAATTGGAGCTCTTCAACATCTCAGTTATTTGGACTTGTCTCATAATAACCTTATTGGTATTATTCCAATTCAAATAGGAGCTCTTCAAAATCTCTGGCATTTGGATTTGTTTCATAACAATTTTACTGGTACTATTCCAATTCAGTTGGAAGCTTATCTTCAACGTGTTAATTATCTCAACTTGTCTAACAACAATATTACATGGGAGACAGCAGGGAATCAAAAGCGTGCACTGCTTCAGAGCAAGTGGTGGAATATTAGCGATAGTGGATCCAACTACCACTATTGTGAATGGGACGGCATATCCTGTGACAACTTTGAAAATGTTGTCAAAATTAAACAACCAAGAATCCATTTAGAGCGGCCTCGGCTGACAGATCTCAACTTCACTGCATTTCAAGAACTAGAATATTTGATTCTTCGTGGAATGGGGCTAACAGGTATTGTTCCATCTCAAATAGGAGCTCTTCAAAATCTCATCTATTTGGACTTGTCTCATAACAACCTTACTGGTAACATTTCAACTCAGATAACAGCTCTTCAACATCTTCGCTATCTAAACTTGTCTGATAACAATATTAGAATGGAGACGGTAGAGAATCAGAAGCGTGCACTACTTCATAGCAAATGGTGGAACATTAGTGATAGTGGCTCCAACGACCATTATTGTGACTGGGATGGCATATTTTGCGATGTCTTTGGAAGAGTTACTGAAATTAACCAACCAAGAATCCGTTCACGCCAACCCCGGCTAACAGACCTCAACTTCATTGCATTTCAAGAACTAGAATATTTGAATCTTCATGGAATGGGGTTAACAGGTTATATCCCTTCTTCAATTTTCAATCTGACAAACCTAGAAGAGTTTGATGTTTCTCAAAATCAAATAATTGGTGGCATACCAACAGAGTTTGGAAATTTCCATTCTCTTACTCGTCTTAATCTCTCCCGCAATAAGCTAACTGGAAAGGTTCCTTACCTTAAGAACCGTTTCTATTTTCACGTTGATTTGAGTCACAACAAAATTAATGGAGAATTACCATCAGAAATATGCACTTTCCCATCAAATTGTAGCATTGATTTGAGCTACAATAATATCACTGGTATTATACCAAGAGAACTTGGTATGTATGCATGCATCAACTTATCATATAATATTTTGAGTGGATATGTTCCAAGAGAAGTCTATAGCTCTTTTCCTCCAGATGTTTTCATTGGCAATAAAGGAATACTTGGTTTAGAAAAGATCCGTGATTCTTCCAAAGGTCTGAAGATCATTATTCCTTTGTCAATATTTATTTCCATCATATTATTTGTGGGTTTGGTCTTGATTGTATCATTAAAAAAGAATAGGAAATCCAAGATTGAGTCGAGTGAAACAAAAAAAGGAGATTTGTTTTCAATATGGAATTTTGATGGTAAAATTGCATATGAAGATATCATTAAAGCAACAAAGGACTTTGACATTAGATATTGCATTGGAACTGGTGCCTATGGAAGTGTTTATAGGACAAAACTTCCAAGTGGCAAAATTGTAGCTGTGAAAAAACTTCATGGAAGAGAATATGAAAACCCAACTTTTTCAAAGAGTTTTCACAATGAAGTGAAAATGCTAACTGAAATTCGACATCGCAGTATTGTAAAGCTTCATGGCTTTTGTTTGCATAATCAATGCATGTTTCTTATCTATGAATACATGGAAAGAGGAAGCCTTTTGTATGTTTTGAACCATGATGATGAAGCTAAAGAGTTGGATTGGAGCAAGAGAGTGAATGCCATAAGGAGGATAGCAAATGCCTTGTTCTACATGCATCATGATTGTGCTCCCCCAATTATCCATCGAGACATAACAAGTAGTAATATACTGTTGAACTCAAAGATGGAGGCTTTTATATCTGACTTTGGCACAGCAAGAATCATTGATCCAAATTCATCAAACCAAACTCTTTTAGTTGGTACTTATGGTTATGTTGCTCCAGAGCTTGCATACACCTTAGTCGTGTCTGAAAAATGTGATGTGTATAGTTTTGGAGTGGTGACATTGGAAACAATCATTGGTAAACATCCTGGAGATTTAATATCATCTATGTCAAAGGCTGAAAGCATTTTGTTAAAAGATGTAGTGGACACACGTCTCCCACTACCATCAAGACAAGATGCAAGAGATGTGATTCTTTTGGTCACAATAGCAATAGCATGCTTGAATCCATCTCCCAAATCTCGACCAACAATGCAGCAAGTGACTCAAAGGCTATTATTGTCCAAGTTGGAATCATTAGCTATTCCTTTCAATGATATCTCAATTCAGCATCTAGTGAATCAAGATATACAAATAATCTAG 2655 0.368 MGVVVALLLCYTSITSASTTLMKAEEKHALLQTNWWNLSITPYKFSDPCDWPEIYCNEFGSVVEMYSPQITSQHPRLVDLNLTAFSYLEELKLSGMGLTGMIPVQIGALQHLSYLDLSHNNLIGIIPIQIGALQNLWHLDLFHNNFTGTIPIQLEAYLQRVNYLNLSNNNITWETAGNQKRALLQSKWWNISDSGSNYHYCEWDGISCDNFENVVKIKQPRIHLERPRLTDLNFTAFQELEYLILRGMGLTGIVPSQIGALQNLIYLDLSHNNLTGNISTQITALQHLRYLNLSDNNIRMETVENQKRALLHSKWWNISDSGSNDHYCDWDGIFCDVFGRVTEINQPRIRSRQPRLTDLNFIAFQELEYLNLHGMGLTGYIPSSIFNLTNLEEFDVSQNQIIGGIPTEFGNFHSLTRLNLSRNKLTGKVPYLKNRFYFHVDLSHNKINGELPSEICTFPSNCSIDLSYNNITGIIPRELGMYACINLSYNILSGYVPREVYSSFPPDVFIGNKGILGLEKIRDSSKGLKIIIPLSIFISIILFVGLVLIVSLKKNRKSKIESSETKKGDLFSIWNFDGKIAYEDIIKATKDFDIRYCIGTGAYGSVYRTKLPSGKIVAVKKLHGREYENPTFSKSFHNEVKMLTEIRHRSIVKLHGFCLHNQCMFLIYEYMERGSLLYVLNHDDEAKELDWSKRVNAIRRIANALFYMHHDCAPPIIHRDITSSNILLNSKMEAFISDFGTARIIDPNSSNQTLLVGTYGYVAPELAYTLVVSEKCDVYSFGVVTLETIIGKHPGDLISSMSKAXESILLKDVVDTRLPLPSRQDARDVILLVTIAIACLNPSPKSRPTMQQVTQRLLLSKLESLAIPFNDISIQHLVNQDIQII 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0628 885 FunFam Leucine-rich repeat receptor protein kinase EMS1 79 177 - -
Prci3g0628 885 Pfam Protein kinase domain 597 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g0628 885 Pfam Leucine rich repeat 239 298 IPR001611 GO:0005515
Prci3g0628 885 Pfam Leucine rich repeat 87 146 IPR001611 GO:0005515
Prci3g0628 885 Pfam Leucine rich repeat 366 425 IPR001611 GO:0005515
Prci3g0628 885 Gene3D Ribonuclease Inhibitor 440 517 IPR032675 -
Prci3g0628 885 SUPERFAMILY L domain-like 44 448 - -
Prci3g0628 885 ProSitePatterns Tyrosine protein kinases specific active-site signature. 716 728 IPR008266 GO:0004672|GO:0006468
Prci3g0628 885 FunFam Leucine-rich repeat receptor protein kinase MSP1 555 670 - -
Prci3g0628 885 Gene3D Ribonuclease Inhibitor 306 435 IPR032675 -
Prci3g0628 885 Gene3D Ribonuclease Inhibitor 17 178 IPR032675 -
Prci3g0628 885 Gene3D Transferase(Phosphotransferase) domain 1 671 866 - -
Prci3g0628 885 ProSiteProfiles Protein kinase domain profile. 592 859 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g0628 885 PANTHER LEUCINE RICH REPEAT KINASE 2 63 185 - -
Prci3g0628 885 ProSiteProfiles Leucine-rich repeat profile. 287 307 IPR001611 GO:0005515
Prci3g0628 885 ProSitePatterns Protein kinases ATP-binding region signature. 598 621 IPR017441 GO:0005524
Prci3g0628 885 FunFam Calmodulin-binding receptor kinase CaMRLK 389 498 - -
Prci3g0628 885 PRINTS Leucine-rich repeat signature 112 125 - -
Prci3g0628 885 PRINTS Leucine-rich repeat signature 261 274 - -
Prci3g0628 885 SUPERFAMILY Protein kinase-like (PK-like) 575 858 IPR011009 -
Prci3g0628 885 Gene3D Phosphorylase Kinase; domain 1 551 670 - -
Prci3g0628 885 SMART LRR_sd22_2 285 305 - -
Prci3g0628 885 SMART LRR_sd22_2 859 879 - -
Prci3g0628 885 SMART LRR_sd22_2 261 280 - -
Prci3g0628 885 SMART LRR_sd22_2 109 130 - -
Prci3g0628 885 SMART LRR_sd22_2 388 407 - -
Prci3g0628 885 Gene3D Ribonuclease Inhibitor 179 305 IPR032675 -
Prci3g0628 885 FunFam MDIS1-interacting receptor like kinase 2 671 863 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0628 Prci-Chr3 8101379 8108141 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0628 98 764 Receptor kinase-like Gene Family AT4G08850 35.034 1.60e-112 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci3g0628 Pkinase 2.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0628 - - pcin:129297054 1763.81