Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0627 ATGGAATTGTCCAATATCATGTCAACTGCGCCAACAATACCAGCAAAAGTAATTGTGGTATTACTATTATGCAAAGCCATTACTTTGTTCCCCAATATTGCTACCGCCATGATTGCAGAGGAGAAACGAGCTCTGCTTCAGAGCACTTGGTGGAATGGCAACAACTTCTCAAACGACCCTTGTGAATGGATTGGCATATCTTGCAATAACATTGGGAGGGTTATTTCTATGAGGACTCCAATACTCACTCATCAACAGCCTCTGCTAGCAGATCTCAATTTCACAGCTTTTTTGAACTTGGAAGATTTGGATCTCCGAGGCATGGGTCTCATAGGTATGATTCCGACTCAGATAGGAGATCTTCGAAATCTCACCTCTTTGCATTTAATAGGCAACTTCTTACAGGGTGAATTACCTTCCACTCTTGCCAATCTCACTCATTTAAAATTTTTGGATTTGAGTAGAAACTACCTAGCTGGAGCCATTCCTTCTCCAATTTTAAATTTGCCGAAATTAGAAGTGCTTAACGTTTCCCAAAATAAGCTCAGTGGAAACATTCCCTATATTGAGAACCATATAAATTTTGAAGGTGACTTTAGTCATAACATGATCAGTGGAGTATTACCACGTAGCTTGTGCTTTACTCCACAAATGTGTCGCATTGATTTGAGCTACAATAATATCTCTGGTAATATATCTAGAGAACTTGGTAAGATGCAATACATCAACTTGCAAAACAATTTTCTCAGCGGCAAAGAGAAGACACGAGATTCCTTCAAAATGTCAGAGTCTACGTTGCACATCTTTATTTCCATGGATATTTCCCTTGCCATCCTGATTGCGGGTTACATCATATTTAAGTTATTTAAAAGGAAAAGGGAATCCAAAATTGAGAGGAGGGAGAGCAAGAATGGGAATTTATTTTCCATATGGAATTTTGATGGTAAAATTGCATATGAAGATATCATTAAAGCAACTGAAGACTTTGACATTAAGTATTGCATTGGAACTGGTGCCTATGGAAGTGTCTATAAGGCACAACTTCCTAGCGGCAAAATTGTAGCTTTGAAAAAACTCCATAGAGGAGAATATGAAAACCCATCATTTGTTAAGAGTTTTCACAATGAAGTGAAGATGTTAGCTGAAATCCGACATCGCAATATCGTGAAGCTTCATGGTTTTTGTTTGCATAATCGATGCATGTTTCTCATCTATGAATTCATGGAAAGAGGAAGCCTTTTTTATGTCTTGAATAAAGCTGATGAAGCTAGAGAGTTTGATTGGAGAAAGAGGGTAAATGTCATTAAAGGAATAGCAAATGCGCTGTTCTACATGCATCATGATTGCGCTCCACCAATTATCCATCGAGACATAACGAGCAGTAATGTATTATTGAATTCTAGGATGGAGGCTGTTGTATCTGACTTCGGCACAGCTAAAATTCTTAACCCAGATTCATCTAATCAAACTCTTTTGGTTGGTACTTATGGTTATGTTGCTCCAGAGCTTGCATACACTTTAGTTGTGACTGAAAAATGTGACGTTTATGGTTTTGGAGTGGTGACATTGGAAACAATCATAGGAAAACATCCTGGAGATTTAATATCATCTTTATCAAATACTTGCACTGAAAGCATTTTGTTAAAAGATGTGTTAGACCCACGTCTTCCACTACCATCAAGACAAGATGCAAGAGATGTGATTCTTTTGATCAAAATTGCATTAGCATGTTTGAAACCATCACCGAACTCTCGACCATCAATGCAGCAAGTGACTCAAAAGCTTTTATTTTTCAAGCTGCCATTAGCTATTCCTTTGAATAACATCTCGATCCAGCATTTGGTAAATCAAGATTTACAAATAATATAG 1869 0.3756 MELSNIMSTAPTIPAKVIVVLLLCKAITLFPNIATAMIAEEKRALLQSTWWNGNNFSNDPCEWIGISCNNIGRVISMRTPILTHQQPLLADLNFTAFLNLEDLDLRGMGLIGMIPTQIGDLRNLTSLHLIGNFLQGELPSTLANLTHLKFLDLSRNYLAGAIPSPILNLPKLEVLNVSQNKLSGNIPYIENHINFEGDFSHNMISGVLPRSLCFTPQMCRIDLSYNNISGNISRELGKMQYINLQNNFLSGKEKTRDSFKMSESTLHIFISMDISLAILIAGYIIFKLFKRKRESKIERRESKNGNLFSIWNFDGKIAYEDIIKATEDFDIKYCIGTGAYGSVYKAQLPSGKIVALKKLHRGEYENPSFVKSFHNEVKMLAEIRHRNIVKLHGFCLHNRCMFLIYEFMERGSLFYVLNKADEAREFDWRKRVNVIKGIANALFYMHHDCAPPIIHRDITSSNVLLNSRMEAVVSDFGTAKILNPDSSNQTLLVGTYGYVAPELAYTLVVTEKCDVYGFGVVTLETIIGKHPGDLISSLSNTCTESILLKDVLDPRLPLPSRQDARDVILLIKIALACLKPSPNSRPSMQQVTQKLLFFKLPLAIPLNNISIQHLVNQDLQII 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0627 622 Pfam Protein kinase domain 333 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g0627 622 Gene3D Phosphorylase Kinase; domain 1 289 407 - -
Prci3g0627 622 Gene3D Transferase(Phosphotransferase) domain 1 408 600 - -
Prci3g0627 622 FunFam Leucine-rich repeat receptor protein kinase MSP1 292 407 - -
Prci3g0627 622 Gene3D Ribonuclease Inhibitor 196 263 IPR032675 -
Prci3g0627 622 PRINTS Leucine-rich repeat signature 148 161 - -
Prci3g0627 622 PRINTS Leucine-rich repeat signature 169 182 - -
Prci3g0627 622 SUPERFAMILY Protein kinase-like (PK-like) 309 599 IPR011009 -
Prci3g0627 622 ProSitePatterns Protein kinases ATP-binding region signature. 335 357 IPR017441 GO:0005524
Prci3g0627 622 ProSiteProfiles Protein kinase domain profile. 329 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g0627 622 FunFam MDIS1-interacting receptor like kinase 2 408 600 - -
Prci3g0627 622 FunFam Nuclear pore complex protein NUP107 33 188 - -
Prci3g0627 622 SUPERFAMILY L domain-like 48 251 - -
Prci3g0627 622 PANTHER LEUCINE RICH REPEAT KINASE 2 85 596 - -
Prci3g0627 622 Gene3D Ribonuclease Inhibitor 36 195 IPR032675 -
Prci3g0627 622 ProSitePatterns Tyrosine protein kinases specific active-site signature. 453 465 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0627 Prci-Chr3 8075578 8077690 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0627 100 501 Receptor kinase-like Gene Family AT4G08850 41.228 9.44e-97 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci3g0627 Pkinase 7.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0627 - - pcin:129307102 1227.62