Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0625 ATGTGTGTGATAGTGGCTTTGCTATTATGCTACGCTTCTATTACTAGTCAATCTGCTACCTTAATGAAAGCAGAGGAGAAACGTGCTCTGCTTCAAACCAAGTGGTGGAATACTAGTATTACTCCCTACAACGTCTCAGACCCTTGTTACTGGCATGACGAGATATCTTGCAATGATTTTGGAAGCGTTACTCAGATGTCTCCACTCCAAATCACTTCACAGCACCCTCGACTAGGAGATCTCAACTTGACAGCATTTTCTTATTTAGAAGAACTTGAGCTTTCAGGAATGGGTTTGACAGGTACCATATCAACTCAAATTGAAGCTCTTCAACATCTTAGACATTTGGGCTTGTCTTATAACAATCTTGCTGGTACCATTCCAATTCAAATAGAAGCTCTTCAAAATCTCACTCATTTGGACTTGTCTAATAATTGCCTTACTGGGGAGACAGTAGAGAATCAAAAGCGCGCACTACTTCAGAGCAAATGGTGGAATATTAGCGATAGTGGATCCAACTACCACTACTGTGACTGGGATGGCATATCCTGTGACAACTTTGAAAATGTTGTTAAAATTAACCAACCAAGAATCCATTTAGAGCGGCCTCGGCTGACAGATCTCAACTTCACTGCATTTCAAGAACTAGAATATTTGATTCTTCGTGGAATGGGGCTAAAAGGTAACATTTCAACTCAGATAGAAGCTCTTCAACATCTTCGCTATCTAAACTTGTCTGATAACAATATTAAAAGTTATCTCCCTTCTTCAATTTTCAATCTGACAAACTTAGAAGAGCTTGATGTTTCTCAAAATCAAATAATTGGTGGTATACCAAAAGAGTTTGGAAATTTCCATTCTCTTACTGTTAATCTCTCCCACAATAAGCTAACAGGAAACGTTCCTTACCTTAGGAACTATCTCGATTTTCAAGTTGATTTGAGTCACAACAAAATTAATGGAGAATTACCATCAAACATATGCACTTCCCCATCAAAATGTAGCATTGATTTGAGCTACAATAATGTCCATGGTATTATACCAATAGAACTTCGTATGTTGAAATACATCAACTTATCATACAATATTTTGAGTGGATATGTTCCGAGAGAAGTTTATAGCTCTTTTCCTCCAGATGTTTTTATTGGCAATAAAGAATTACTTGGTTTAGAAAAGATCCATGATTCTTCCAAATTTCTGAAGATCATTATTCCTTTGACAATATTTATTTCCATCATATTATTTGTGGGTTTGGTCTTCATTATATCATTAAAAAAGAATGGGGAATCCAAGATTGAGAGGAGAGAAACAAAAAAAGGAGATTTGTTTTCCATATGGAATTTTGATGGTAAAATTGCATATGAAGATATCATTGAAGCAACAAAGGACTTTGACATTAGATATTGTATTGGAACTGGTGCCTATGGAAGTGTTTACAGGACAGAACTTCCAAGTGGCAAGATTGTAGCTGTGAAAAAACTTCATGGGAGAGAATATGAAAACCCAACATTTTCAAAGAGTTTTCACAATGAAGTGAAAATGCTAATTGAAATTCGACATCGCAGTATTGTAAAGCTTCATGGCTTTTGTTTGCATAATCAATGCATGTTTCTCATCTATGAATACATGGAAAGTGGAAGCCTTTTGTATGTTTTGAACCATGATGATGAAGCTAAAGAGTTGGATTGGAGCAAGAGAGTGAATGCCATAAAGCGGATAGCAAATGCCTTGTTTTACATGCATCATGATTGTGCTCCCCCAATTATCCATCGAGACATAACAAGTAGTAATATACTGTTGAACTCAAAGATGGAGGCTTTTATATCTGACTTTGGCACAGCAAGAATCATTGATCCAAATTCATCAAATCAAACTCTTTTAGTTGGTACATATGGTTATGTTGCTCCAGAGCTTGCGTACACCTTAGTTGTGACCGAAAAATGTGATGTGTATAGTTTTGGAGTGGTGACATTGGAAACAATCATCGGTAAACATCCTGGAGATTTAATATCATCTATGTCAAAGGCCTGCACTAAAAGCATTTTGTTAAAAGATGTTGTGGACACACGTCTCCCACTACCATTAAGACAAGATGCAAGAGATGTGATTCTTTTGGTCACAATAGCAATAGCATGCTTGAATCCATCTCCCAAATCTCGACCAACAATGCAGCAAGTGACTCAAAGGCTATTGTTGCCCAAGCTGGAGTCATTCACTATTCCTTTCAATGATATCTCAATTCAACATATAGTGAATCAAGATATACAAATTATCTAG 2277 0.3658 MCVIVALLLCYASITSQSATLMKAEEKRALLQTKWWNTSITPYNVSDPCYWHDEISCNDFGSVTQMSPLQITSQHPRLGDLNLTAFSYLEELELSGMGLTGTISTQIEALQHLRHLGLSYNNLAGTIPIQIEALQNLTHLDLSNNCLTGETVENQKRALLQSKWWNISDSGSNYHYCDWDGISCDNFENVVKINQPRIHLERPRLTDLNFTAFQELEYLILRGMGLKGNISTQIEALQHLRYLNLSDNNIKSYLPSSIFNLTNLEELDVSQNQIIGGIPKEFGNFHSLTVNLSHNKLTGNVPYLRNYLDFQVDLSHNKINGELPSNICTSPSKCSIDLSYNNVHGIIPIELRMLKYINLSYNILSGYVPREVYSSFPPDVFIGNKELLGLEKIHDSSKFLKIIIPLTIFISIILFVGLVFIISLKKNGESKIERRETKKGDLFSIWNFDGKIAYEDIIEATKDFDIRYCIGTGAYGSVYRTELPSGKIVAVKKLHGREYENPTFSKSFHNEVKMLIEIRHRSIVKLHGFCLHNQCMFLIYEYMESGSLLYVLNHDDEAKELDWSKRVNAIKRIANALFYMHHDCAPPIIHRDITSSNILLNSKMEAFISDFGTARIIDPNSSNQTLLVGTYGYVAPELAYTLVVTEKCDVYSFGVVTLETIIGKHPGDLISSMSKACTKSILLKDVVDTRLPLPLRQDARDVILLVTIAIACLNPSPKSRPTMQQVTQRLLLPKLESFTIPFNDISIQHIVNQDIQII 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0625 758 FunFam Nuclear pore complex protein NUP107 150 303 - -
Prci3g0625 758 SUPERFAMILY Protein kinase-like (PK-like) 447 730 IPR011009 -
Prci3g0625 758 ProSitePatterns Tyrosine protein kinases specific active-site signature. 588 600 IPR008266 GO:0004672|GO:0006468
Prci3g0625 758 Gene3D Ribonuclease Inhibitor 14 153 IPR032675 -
Prci3g0625 758 SMART LRR_sd22_2 261 280 - -
Prci3g0625 758 SMART LRR_sd22_2 134 154 - -
Prci3g0625 758 Gene3D Ribonuclease Inhibitor 312 389 IPR032675 -
Prci3g0625 758 Gene3D Transferase(Phosphotransferase) domain 1 543 737 - -
Prci3g0625 758 Gene3D Phosphorylase Kinase; domain 1 425 542 - -
Prci3g0625 758 ProSiteProfiles Protein kinase domain profile. 464 732 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g0625 758 ProSiteProfiles Leucine-rich repeat profile. 239 261 IPR001611 GO:0005515
Prci3g0625 758 Pfam Protein kinase domain 469 728 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g0625 758 SMART LRR_typ_2 110 133 IPR003591 -
Prci3g0625 758 SMART LRR_typ_2 237 260 IPR003591 -
Prci3g0625 758 SMART LRR_typ_2 134 162 IPR003591 -
Prci3g0625 758 SMART LRR_typ_2 261 284 IPR003591 -
Prci3g0625 758 PANTHER LEUCINE RICH REPEAT KINASE 2 85 736 - -
Prci3g0625 758 FunFam Leucine-rich repeat receptor protein kinase MSP1 427 542 - -
Prci3g0625 758 PRINTS Leucine-rich repeat signature 261 274 - -
Prci3g0625 758 PRINTS Leucine-rich repeat signature 137 150 - -
Prci3g0625 758 FunFam MDIS1-interacting receptor like kinase 2 543 736 - -
Prci3g0625 758 SUPERFAMILY RNI-like 86 368 - -
Prci3g0625 758 Gene3D Ribonuclease Inhibitor 154 308 IPR032675 -
Prci3g0625 758 ProSitePatterns Protein kinases ATP-binding region signature. 470 493 IPR017441 GO:0005524
Prci3g0625 758 Pfam Leucine rich repeat 215 274 IPR001611 GO:0005515
Prci3g0625 758 Pfam Leucine rich repeat 88 145 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0625 Prci-Chr3 7983258 7996464 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0625 76 636 Receptor kinase-like Gene Family AT4G08850 34.783 3.57e-98 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci3g0625 Pkinase 1.1e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0625 - - pcin:129305349 1520.37