Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0623 ATGGGTGTGATAGTGGCTTTGCTATTATGCTACGCTTCTATTACTAGTCAATCTGCTAACTTAATGAAAGCAGAGGAGAAACGTGCTCTGCTTCAAACCAAGTGGTGGAATACTAGTATTACTCCCTACAACGTCTCAGACCCTTGTTACTGGCACGACGAGATATCTTGCAATGATTTTGGAAGCGTTACTCAGATGTCTCCACTCCAAATCACTTCACAGCACCCTCGACTAGGAGATCTCAATTTGACAGCATTTTCTTATTTAGAAGAACTTGAGCTTTCAAGAATGGGTTTGACAGGTAGCATTTCAACTCAAATTGGAGCTCTTCAAAATCTCACTTATTTGGACTTGTCTAATAACCACCTTACTGGCATCATTTCCTCTCATATAGGAGCTTTTCATTATCTCTACCATTTAGACTTTTCTCATAATGACCTCACTGGGGATGTCCCTTATATTCATAAAAATATGCTTGATGAAATTATTTTTAATGGTAACTTTAGTCACAACAAAATCAATGGAGTGTTACCATCTAGAATATGCACTTACCCTCCTTTATGTAGCATTGATTTGAGCTACAATATTATCTCTGGTAGTATACCTAGAGAACTTGGTGAGTTTTTCTCCATCAACTTGTCATACAATTTTCTCAATGGCTATGTTCCTAATGAAGTTTATAGCTCTTTTCCACATGACATTTTAAACGGCAATAAAGGGCTACTTGGTCCAGAGATGATCCATGGTTCTTCTAAAAGTCCAAAGTCTATGTTGAAAATCATAATTCCTTTGACAGTTTTTCTTGTCATCATATTTGTTGCGGTTTTTCTCATATTTGCGTCATTCAAAAAGAACAAGAAATCCAAAACGGAGACAAGAGAAACAAAAAAAGGGGATTTGTTTTCCATATGGAATTTTAACGGTAAAATTGCATATGAAGATATCATTGAAGCAACAGAGGACTTTCATATCAAATATTGTATTGGAACTGGTGCATATGGAAGCGTTTATATGGCACAACTTCCTTGTGGGAGAATCGTAGCAGTGAAAAAACTTCACAAAAGAGAATCTGACAACCCATCTTTTGCAAAGAGCTTCCACAATGAAGTGAAAATGCTAACTGAAATTCGTCATCGTAGTATTGTAAAGCTTTATGGTTTCTGTTTGCATAATCAATGCATGTTTCTCATCTATGAATACATGGAAAGTGGAAGCCTTCTTTATGTCTTGAATCATGATGATGAAGCTAAAGGGTTGGATTGGAGCAAGAGAGTGAATGCCATAAAAGGAGTAGCAAATGCCTTATTCTACATGCATCATGATTGTTCTCCTCCAATCATCCATCGAGACATAACAAGTAGTAATGTACTATTGAACTCAAATATGGAGGCATTTATATCTGACTTTGGCACAGCAAGAATCATTGATCCAGATTCATCTAATCAAACTTTTTTAGTTGGTACTTATGGTTATGTTGCTCCAGAGCTTGCATATACTTTAGTTGTGACTGAAAAATGTGATGTGTATAGTTTTGGAGTGGTGACATTGGAAACAATTATCGGTAAACATCCTGGAGATTTAATATCATCTCTGTCAAAGACCTGCACAAAAAGCATTTTTTTAAAAGATGTGTTGGACACACGTCTCCCATTGCCATCAAGACAAGATGCAAGAGATGTGATTCTTTTGGTCACAATAGCACTAGCATGCTTGAATCCATCTCCCAGATGTCGACCATCAATGCAACAAGTGACTCAAAGACTTTTATTTTCCAAGCTACCACTAGCTATTCCTTTAAATAACATCTCAATCCAGCATTTGGTGAATCAAGATTTACAAATAATCTGGCCCGGCAGTTAG 1860 0.3672 MGVIVALLLCYASITSQSANLMKAEEKRALLQTKWWNTSITPYNVSDPCYWHDEISCNDFGSVTQMSPLQITSQHPRLGDLNLTAFSYLEELELSRMGLTGSISTQIGALQNLTYLDLSNNHLTGIISSHIGAFHYLYHLDFSHNDLTGDVPYIHKNMLDEIIFNGNFSHNKINGVLPSRICTYPPLCSIDLSYNIISGSIPRELGEFFSINLSYNFLNGYVPNEVYSSFPHDILNGNKGLLGPEMIHGSSKSPKSMLKIIIPLTVFLVIIFVAVFLIFASFKKNKKSKTETRETKKGDLFSIWNFNGKIAYEDIIEATEDFHIKYCIGTGAYGSVYMAQLPCGRIVAVKKLHKRESDNPSFAKSFHNEVKMLTEIRHRSIVKLYGFCLHNQCMFLIYEYMESGSLLYVLNHDDEAKGLDWSKRVNAIKGVANALFYMHHDCSPPIIHRDITSSNVLLNSNMEAFISDFGTARIIDPDSSNQTFLVGTYGYVAPELAYTLVVTEKCDVYSFGVVTLETIIGKHPGDLISSLSKTCTKSIFLKDVLDTRLPLPSRQDARDVILLVTIALACLNPSPRCRPSMQQVTQRLLFSKLPLAIPLNNISIQHLVNQDLQIIWPGS 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0623 619 ProSitePatterns Tyrosine protein kinases specific active-site signature. 446 458 IPR008266 GO:0004672|GO:0006468
Prci3g0623 619 ProSiteProfiles Protein kinase domain profile. 322 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g0623 619 SUPERFAMILY Protein kinase-like (PK-like) 302 592 IPR011009 -
Prci3g0623 619 Gene3D Phosphorylase Kinase; domain 1 281 400 - -
Prci3g0623 619 Gene3D Transferase(Phosphotransferase) domain 1 401 593 - -
Prci3g0623 619 FunFam MDIS1-interacting receptor like kinase 2 401 594 - -
Prci3g0623 619 PANTHER LEUCINE RICH REPEAT KINASE 2 60 592 - -
Prci3g0623 619 ProSiteProfiles Leucine-rich repeat profile. 112 133 IPR001611 GO:0005515
Prci3g0623 619 ProSitePatterns Protein kinases ATP-binding region signature. 328 351 IPR017441 GO:0005524
Prci3g0623 619 Pfam Protein kinase domain 323 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g0623 619 Pfam Leucine Rich Repeat 112 132 IPR001611 GO:0005515
Prci3g0623 619 FunFam Leucine-rich repeat receptor protein kinase MSP1 284 400 - -
Prci3g0623 619 SUPERFAMILY L domain-like 57 226 - -
Prci3g0623 619 Gene3D Ribonuclease Inhibitor 166 248 IPR032675 -
Prci3g0623 619 Gene3D Ribonuclease Inhibitor 19 165 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0623 Prci-Chr3 7868211 7874382 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0623 62 494 Receptor kinase-like Gene Family AT4G08850 41.176 1.51e-99 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci3g0623 Pkinase 4.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0623 - - pcin:129297054 789.26