Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0621 ATGGGACACATGGAGAGAGTTATTCCATCTTTCAAGGGTGTTTTACTCCTTTGTTCAATTTTAGTGTTTGATTTGGTGCTAAATGTTTCTGGTAATGCCGAAGGTGATGCCCTGAATGCATTTAAGACCAACGTAGCTGATCCTAACAATGTTCTTCAAAGCTGGGATGCTACCCTTGTCAATCCTTGCACATGGTTTCATGTTACATGCAATAGTGAAAATAACGTGACCCGTGTTGATCTTGGAAATGCTGACCTTTCGGGTTCGCTAGTTGCACAGCTTGGTCTACTCCCAAACTTGCAGTACTTGGAGCTTTATAGTAATAATATAACTGGAAAAATCCCACCTGAATTTGGAAATTTGACAAATTTGGTGAGCTTGGATCTGTATACCAATCGCATATCTGGTGGCATCCCAGAATCACTGGGCAAGCTTCAAAAACTACGTTTCCTGCGTCTCAACAATAACACCTTGACTGGAGTTATTCCCATGACCTTGACTACTGTTAATTCGCTTCAAGTCCTTGATCTTTCAAACAACAATCTACAAGGAGACATCCCAACTAGTGGTTCATTTCAAGCGTTTACCATGCTCAGTTTCAATGGTAATCCTCATTTGAAACCAATAAACATTACACCTGGACCAATTACGCCAACACCGCCGTCATCTCCTTCAGGCAATAGTGCTACTGGAGCTATTGCGGGAGGAGTTGCTGCTGCTGCTGCTCTTATGTTTGCAGCCCCTGCCATTGCACTTGCTTATTGCCGGAAGAAGAGACCACAAGATTATTTCTTTGATGTTCCTGCTGAGGAGGACCCTGAAGTCCACCTTGGTCAGCTTAAAAAGTTTCCCCTGCGTGAGCTGCAAGTCGCAACAGACAACTTCAGTAACAAAAACATTCTGGGTAGAGGTGGATTTGGTAAGGTTTACAAAGGGCGTTTAACTGATGGGTCTCTAGTTGCAGTGAAAAGACTTAAAGAGGAACGCACTCAGGGTGGAGAGCTGCAATTTCAAACAGAAGTAGAAATGATCAGCTTGGCTGTCCATCGAAATTTGCTCCGGCTGCGTGGTTTTTGCATGACACCAACCGAACGGTTGCTTGTGTATCCTTTCATGGCTAATGGTAGTGTGGCATCATGTTTACGAGACCGCCCGGAAACAAGACCCCCACTTGAATGGCCTGTTCGGAAGAGGATTTCACTGGGAGCTGCTAGGGGGCTTGCTTATTTGCATGACCATTGTGACCCAAAGATCATTCACCGTGATGTTAAAGCTGCAAATATATTATTGGATGAAGAATATGAAGCAGTTGTTGGGGACTTTGGCTTGGCAAAACTAATGAATTACAAAGACACTCACGTTACCACTGCTGTGCGTGGTACAATTGGGCACATTGCACCAGAATACCTCTCCACCGGAAAGTCTTCAGAGAAGACTGATGTTTTTGGTTACGGTGTGATGCTTCTTGAACTAATTACTGGACAGAGGGCTTTCGATCTTGCACGACTCGCGAATGATGATGATGTCATGTTACTTGATTGGGTGAAAGGGCTTTTGAAAGACAAGAGATTGGAAACACTAGTGGATGCTGATTTGGAGGGTGAATATAATGAAGAGGAAGTGGAGCAACTAATCCAAGTGGCCTTGCTCTGCACGCAAAGCTCGGCTATGGAACGGCCAAAGATGTCTGAGGTGGTGAGGATGCTTGAAGGTGATGGTTTGGCTGAAAAGTGGGATCAATGGCAGAAAGATGAGATGTACAGGAGAGATAATCAAACTCTTCTCCCTCATCCTAACTGGCCCATTGTGGACTCAGGTTCACATATCCCCCCAGATGAACTGTCTGGTCCAGATGATCTTCTCAACTTTAGTACCGTGAAGCATATACACAATCCTTTCATACCTATAGAAGATGGCTCAAACCATTTGGAACTGATAGTACTCAGCAACAACGTTATAGCATATGATTTTGGCAAAATCACTCCAGCGTCCTTGTAA 1998 0.4419 MGHMERVIPSFKGVLLLCSILVFDLVLNVSGNAEGDALNAFKTNVADPNNVLQSWDATLVNPCTWFHVTCNSENNVTRVDLGNADLSGSLVAQLGLLPNLQYLELYSNNITGKIPPEFGNLTNLVSLDLYTNRISGGIPESLGKLQKLRFLRLNNNTLTGVIPMTLTTVNSLQVLDLSNNNLQGDIPTSGSFQAFTMLSFNGNPHLKPINITPGPITPTPPSSPSGNSATGAIAGGVAAAAALMFAAPAIALAYCRKKRPQDYFFDVPAEEDPEVHLGQLKKFPLRELQVATDNFSNKNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISLAVHRNLLRLRGFCMTPTERLLVYPFMANGSVASCLRDRPETRPPLEWPVRKRISLGAARGLAYLHDHCDPKIIHRDVKAANILLDEEYEAVVGDFGLAKLMNYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKDKRLETLVDADLEGEYNEEEVEQLIQVALLCTQSSAMERPKMSEVVRMLEGDGLAEKWDQWQKDEMYRRDNQTLLPHPNWPIVDSGSHIPPDELSGPDDLLNFSTVKHIHNPFIPIEDGSNHLELIVLSNNVIAYDFGKITPASL 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0621 665 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Prci3g0621 665 SUPERFAMILY Protein kinase-like (PK-like) 275 570 IPR011009 -
Prci3g0621 665 SMART serkin_6 295 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g0621 665 Pfam Protein kinase domain 296 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g0621 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Prci3g0621 665 SUPERFAMILY L domain-like 34 223 - -
Prci3g0621 665 Pfam Leucine Rich repeats (2 copies) 98 134 IPR025875 -
Prci3g0621 665 ProSiteProfiles Protein kinase domain profile. 295 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g0621 665 FunFam Somatic embryogenesis receptor kinase 1 30 218 - -
Prci3g0621 665 ProSiteProfiles Leucine-rich repeat profile. 171 193 IPR001611 GO:0005515
Prci3g0621 665 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Prci3g0621 665 Gene3D Transferase(Phosphotransferase) domain 1 372 589 - -
Prci3g0621 665 SMART LRR_typ_2 97 120 IPR003591 -
Prci3g0621 665 SMART LRR_typ_2 121 144 IPR003591 -
Prci3g0621 665 SMART LRR_typ_2 169 194 IPR003591 -
Prci3g0621 665 SMART LRR_typ_2 145 168 IPR003591 -
Prci3g0621 665 Pfam Leucine Rich Repeat 171 189 IPR001611 GO:0005515
Prci3g0621 665 FunFam Somatic embryogenesis receptor-like kinase 1 372 589 - -
Prci3g0621 665 Gene3D Ribonuclease Inhibitor 31 212 IPR032675 -
Prci3g0621 665 Gene3D Phosphorylase Kinase; domain 1 264 371 - -
Prci3g0621 665 FunFam Somatic embryogenesis receptor kinase 1 264 371 - -
Prci3g0621 665 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 16 579 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0621 Prci-Chr3 7795106 7813389 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0621 4 617 Receptor kinase-like Gene Family AT4G33430 72.673 0.0 912
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Prci3g0621 Pkinase 6.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0621 K13416 - twl:119982367 954.896