Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0619 ATGTTCATGGTAATGCCGAAGACAGGTGAGGCCCTGAATGCATTTAGGACCAACGTAGCTGATCCTAACAATGTTCTTCAAAGCTGGGATGCTACCCTCGTCAATCCTTGCACATGGTTTCATGTTACATGCAATAGTGAAAATAGCGTGATCCGCGTTGATCTTGGAAATGCCGGACTTTCGGGTTCACTAGTTGCACAGCTTGGTCAACTCCCAAATCTGCAGTACTTGGAGCTTTTTAGTAACAATATAACTGGAAAAATCCCACCAGAATTTGGAAATTTGACAAATTTGGAGAGCTTGGATCTGTATGCCAATCACATATCTGGTAGCATCCCTGAATCACTGGGCAAGCTTCAAAAACTACGTTTCCTGCGTCTCAACAATAACGGCTTGACTGGAGCCATTCCCATGACCTTGACTACTGTTTATTCACTGCAAGTCCTTGATCTTTCAAGCAACAGTCTACAAGGACACATCCCAACCAATGGTTCATTTCAAGTGTTTACCTCCCTCAGTTTTGACAAAAATCCTCATTTGAACCCAATAAACATTACACCTGGACCAATTTCACCAACTCCGCCGCCATCTTCTTCAGGCAACAGTGCTACTGGAGCTATTGCGGGAGGAGTTGCTGCTGCTGCTGCTCTAATGTTTGCCGCCCCTGCCATTGCACTTGCTTATTGCCGGAAGAAGAGACCACAAGATTATTTCTTTGATGTTCCTGCTGAGGAGGACCCTGAAGTTCACCTTGGTCAGCTTAAAAAGTTTCCACTGCGTGAGCTACAAGTGGCGACAGACAACTTTAGTAACAAAAACATTCTTGGTAGAGGTGGATTTGGTAAGGTTTACAGAGGACGTTTAACTGATGGGTCTCTAGTTGCGGTGAAAAGACTTAAAGAGGAACGCACTCAGGGTGGAGAGCTGCAATTTCAAACAGAAGTAGAAATGATCAGCTTGGCTGTCCATCGTAATTTGCTCCGGCTGCGTGGTTTTTGCATGACACCAACTGAACGGTTGCTTGTGTATCCTTACATGGCTAATGGCAGTGTGGCATCATGTTTACGAGACCGCCCGGAATCAAAGCGTCCACTTGAATGGCCTGTTCGGAAGAGGATTTCACTGGGAGCTGCTAGGGGGCTTGCTTATTTGCATGACCATTGTGATCCAAAGATCATTCACCGTGATGTTAAAGCTGCAAATATATTATTGGATGAAGAATATGAAGCAGTTGTTGGGGACTTTGGCTTGGCAAAGCTAATGGGTTACAAAGACACTCATGTTACCACTGCTGTGCGTGGTACAATTGGGCACATTGCACCAGAATACCTCTCCACTGGAAAGTCTTCAGAGAAGACTGATGTTTTTGGTTATGGTGTGATGCTTCTTGAACTAATAACCGGACAGAGGGCTTTCGATCTTGCACGACTCGCCAATGATGATGATGTCATGTTACTTGATTGGGTGAAAGGGCTTTTGAAAGACAAGAGATTGGAAACACTAGTGGATGCTGAATTGGAGGGTGAATATAATGAAGAGGAGGTAGAGCAACTAATCCAAGTGGCCTTGCTCTGCACGCAAAGCTCGGCTATGGAACGGCCAAAGATGTCTGAGGTGGTGAGGATGCTTGAAGGTGATGGTTTGGCTGAAAAGTGGGATCAGTGGCAGTTAGATGAGATATACAGGAGAGATCATCAAACTCTTCCCCCCCATCCGAACTGGCCGATTGTGGACTCAGGTTCACATATCCCCCCAGATGAACTGTCTGGTCCCAGATGA 1779 0.4564 MFMVMPKTGEALNAFRTNVADPNNVLQSWDATLVNPCTWFHVTCNSENSVIRVDLGNAGLSGSLVAQLGQLPNLQYLELFSNNITGKIPPEFGNLTNLESLDLYANHISGSIPESLGKLQKLRFLRLNNNGLTGAIPMTLTTVYSLQVLDLSSNSLQGHIPTNGSFQVFTSLSFDKNPHLNPINITPGPISPTPPPSSSGNSATGAIAGGVAAAAALMFAAPAIALAYCRKKRPQDYFFDVPAEEDPEVHLGQLKKFPLRELQVATDNFSNKNILGRGGFGKVYRGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISLAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRDRPESKRPLEWPVRKRISLGAARGLAYLHDHCDPKIIHRDVKAANILLDEEYEAVVGDFGLAKLMGYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKDKRLETLVDAELEGEYNEEEVEQLIQVALLCTQSSAMERPKMSEVVRMLEGDGLAEKWDQWQLDEIYRRDHQTLPPHPNWPIVDSGSHIPPDELSGPR 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0619 592 SMART serkin_6 269 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g0619 592 FunFam Somatic embryogenesis receptor-like kinase 1 346 563 - -
Prci3g0619 592 SMART LRR_typ_2 95 119 IPR003591 -
Prci3g0619 592 SMART LRR_typ_2 71 94 IPR003591 -
Prci3g0619 592 SMART LRR_typ_2 143 168 IPR003591 -
Prci3g0619 592 Gene3D Phosphorylase Kinase; domain 1 238 345 - -
Prci3g0619 592 Pfam Protein kinase domain 270 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g0619 592 FunFam Somatic embryogenesis receptor kinase 1 5 192 - -
Prci3g0619 592 Pfam Leucine rich repeat N-terminal domain 9 45 IPR013210 -
Prci3g0619 592 Gene3D Ribonuclease Inhibitor 7 185 IPR032675 -
Prci3g0619 592 ProSiteProfiles Protein kinase domain profile. 269 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g0619 592 SUPERFAMILY Protein kinase-like (PK-like) 249 544 IPR011009 -
Prci3g0619 592 Pfam Leucine Rich repeats (2 copies) 72 112 IPR025875 -
Prci3g0619 592 ProSitePatterns Serine/Threonine protein kinases active-site signature. 392 404 IPR008271 GO:0004672|GO:0006468
Prci3g0619 592 FunFam Somatic embryogenesis receptor kinase 1 238 345 - -
Prci3g0619 592 MobiDBLite consensus disorder prediction 571 592 - -
Prci3g0619 592 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 8 553 - -
Prci3g0619 592 Gene3D Transferase(Phosphotransferase) domain 1 346 563 - -
Prci3g0619 592 ProSitePatterns Protein kinases ATP-binding region signature. 275 297 IPR017441 GO:0005524
Prci3g0619 592 SUPERFAMILY L domain-like 7 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0619 Prci-Chr3 7764158 7772147 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0619 9 592 Receptor kinase-like Gene Family AT4G33430 72.397 0.0 877
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Prci3g0619 Pkinase 3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0619 K13416 - twl:119982367 921.768