Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0618 ATGAGACACATGAGGAGAATTATTCCATCTTTCATGGGTGTTTTACTCCTTTGTTCAATTTTAGTGTTCGGTTTGGCGCTAAATGTTCATGGTAATGCCGAAGGTGATGCCCTGAATGCATTTAGGACCAACGTAGCTGATCCTAACAATGTTCTTCAAAACTGGGATGCTGCCCTTGTCAATCCTTGCACATGGTTTCATGTTACATGCAATAGTGAAAATAGCGTGATCCGCATTGATCTTGGAAATGCCGGACTTTCAGGTTCACTAGTTGCACAGCTTGGTCAACTCCCAAATTTGCAGTACTTGGAGCTTTCTAGTAACAATATAACTGGAAAAATCCCACCAGAATTTGGAAATTTGACAAATTTGGAGAGCTTGGATCTGTATGCGAATCACATATCTGGTAGCATCCCTGAATCACTGGGCAGGCTTCAAAAACTACGTTTCCTGCGTCTCAACAATAATGGCTTGACTGGAGCCATTCCCATGACCTTGACTACTGTTTATTCACTGCAAGTCCTTGATCTTTCAAGCAACAGTCTACAAGGAGACATCCCAACCAATGGTTCATTTCAAGTGTTTACCTCCCTCAGTTTTGACAAAAATCCTCATTTGAACCCAATAAACATTACACCTGGACCAATTTTGCCAACTCCGCCACCATCTTCTTCAGGCAATAGTGCTACTGGAGCTATTGCGGGAGGAGTTGCTGCTGCTGCTGCTCTAATGTTTGCAGCCCCTGCCATTGCACTTGCTTATTGCCGGAAGAAGGGACCACAAGATTATTTCTTTGATGTTGCTGCTGAGGAGGACCCTGAAGTTCACCTTGGTCAGCTTAAAAAGTTTCCACTGCGTGAGCTACAAGTGGCGACAGACAACTTTAGTAACAAAAACATTCTTGGTAGAGGTGGATTTGGTAAGGTTTACAAAGGACGTTTAACTGATGGGTCTCTAGTTGCGGTGAAAAGACTTAAAGAGGAACGCACTCAGGGTGGAGAGCTGCAATTTCAAACAGAAGTAGAAATGATCAGCTTGGCTGTCCATCGTAATTTGCTCCGGCTGCGTGGTTTTTGCATGACACCAACTGAACGGTTGCTTGTGTATCCTTTCATGGCTAATGGCAGTGTGGCATCATGTTTACGAGACCGCCCGGAATCAAAGCCTCCACTTGAATGGCCTGTTCGGAAGAGGATTTCACTGGGAGCTGCTAGGGGGCTTGCTTATTTGCATGACCATTGTGATCCAAAGATCATTCACCGTGATGTTAAAGCTGCAAATATATTATTGGATGAAGAACATGAAGCAGTTGTTGGGGACTTTGGCTTGGCAAAACTAATGGATTGCAAAGACACTCATGTTACAACTGCTGTGCGTGGCACAATTGGGCACATTGCACCAGAATACCTCTCCACTGGAAAGTCTTCGGAGAAGACTGATGTTTTTGGTTATGGTGTGATGCTTCTTGAACTAATAACCGGTCAGAGGGCTTTCAATCTTGCACGACTCGCCTGTGATGATGATGTCATGTTACTTGATTGGGTGAAAGGGCTTTTGAAAGACAAGAGATTGGAAACACTAGTGGATGATGATTTGGAGGGTGAATATAAGGAACAGGAGGTGGAGCAACTAATCCAAGTGGCCTTGCTCTGCACGCAAAGCTCGGCTATGGAACGGCCAAAGATGTCTGAGGTGGTGAGGATGCTTGAAGGTGATGGTTTGGCTGAAAAGTGGGATCAGTGGCAGTTAGATGAGATGTACAGGAGAGATCATCAAACTCTTCTCCCCAATCCTAACTGGCCGATTGTGGACTCAGGTTCACATATCCCCCCAGATGAACTGTCTGGTCCCAGATGA 1857 0.4491 MRHMRRIIPSFMGVLLLCSILVFGLALNVHGNAEGDALNAFRTNVADPNNVLQNWDAALVNPCTWFHVTCNSENSVIRIDLGNAGLSGSLVAQLGQLPNLQYLELSSNNITGKIPPEFGNLTNLESLDLYANHISGSIPESLGRLQKLRFLRLNNNGLTGAIPMTLTTVYSLQVLDLSSNSLQGDIPTNGSFQVFTSLSFDKNPHLNPINITPGPILPTPPPSSSGNSATGAIAGGVAAAAALMFAAPAIALAYCRKKGPQDYFFDVAAEEDPEVHLGQLKKFPLRELQVATDNFSNKNILGRGGFGKVYKGRLTDGSLVAVKRLKEERTQGGELQFQTEVEMISLAVHRNLLRLRGFCMTPTERLLVYPFMANGSVASCLRDRPESKPPLEWPVRKRISLGAARGLAYLHDHCDPKIIHRDVKAANILLDEEHEAVVGDFGLAKLMDCKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFNLARLACDDDVMLLDWVKGLLKDKRLETLVDDDLEGEYKEQEVEQLIQVALLCTQSSAMERPKMSEVVRMLEGDGLAEKWDQWQLDEMYRRDHQTLLPNPNWPIVDSGSHIPPDELSGPR 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0618 618 Gene3D Phosphorylase Kinase; domain 1 264 371 - -
Prci3g0618 618 SMART LRR_typ_2 169 194 IPR003591 -
Prci3g0618 618 SMART LRR_typ_2 121 145 IPR003591 -
Prci3g0618 618 SMART LRR_typ_2 97 120 IPR003591 -
Prci3g0618 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Prci3g0618 618 Gene3D Transferase(Phosphotransferase) domain 1 372 589 - -
Prci3g0618 618 FunFam Somatic embryogenesis receptor kinase 1 264 371 - -
Prci3g0618 618 SMART serkin_6 295 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g0618 618 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Prci3g0618 618 ProSiteProfiles Leucine-rich repeat profile. 99 121 IPR001611 GO:0005515
Prci3g0618 618 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 14 579 - -
Prci3g0618 618 FunFam Somatic embryogenesis receptor kinase 1 30 217 - -
Prci3g0618 618 SUPERFAMILY Protein kinase-like (PK-like) 275 570 IPR011009 -
Prci3g0618 618 ProSitePatterns Protein kinases ATP-binding region signature. 301 323 IPR017441 GO:0005524
Prci3g0618 618 Pfam Leucine rich repeat 98 158 IPR001611 GO:0005515
Prci3g0618 618 Pfam Protein tyrosine and serine/threonine kinase 298 569 IPR001245 GO:0004672|GO:0006468
Prci3g0618 618 FunFam Somatic embryogenesis receptor-like kinase 1 372 589 - -
Prci3g0618 618 ProSiteProfiles Protein kinase domain profile. 295 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g0618 618 MobiDBLite consensus disorder prediction 598 618 - -
Prci3g0618 618 SUPERFAMILY L domain-like 34 212 - -
Prci3g0618 618 Gene3D Ribonuclease Inhibitor 31 211 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0618 Prci-Chr3 7715001 7722117 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0618 5 618 Receptor kinase-like Gene Family AT4G33430 70.934 0.0 887
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Prci3g0618 Pkinase 1.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0618 K13416 - twl:119982367 949.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g0618 3 7715001 7722117 Prci3g0618 3 7715001 7722117 CCT