Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0602 ATGGACAGAAGTGTTGGAATTATGGGTGAAGAGTTGAGCGTCTTCAGAGCAGTTGAACCATTGTCTGAGGATTTTGATCCAACGGCGGTGATTAAAGATCCTGTACCACCAGTAGTTGAAAATAATGGGAGTGTTGATGCGATGACCATGATGAGGGATGATAAAAATAAAAGAGAGATAGTGCTAGGCAGGAACGTTCATACCACATGCTTGGAAGTTACGGAACCAGATGCTGATGATGAGATGACAGGGGACAGGGAAGCTTATATGGCAAGTGTTTTGGCTAGATACAGGAAATCTCTGATGGAAAGGACAAGGCATCATTTAGGATATCCCTATAATTTGGATTTCGACTATGGTGCCCTTGCACAGCTGCAGCACTTTTCAATAAACAACTTAGGAGATCCATTTATTGAAAGTAACTACGGCGTCCACTCACGGCAGTTTGAAGTAGGTGTTTTGGATTGGTTTGCCCGATTATGGGAGATTGAGAAAAATGAGTACTGGGGTTATATAACAAACTGTGGCACCGAAGGGAATCTTCATGGCATTCTTGTTGGGAGAGAGGTTTTCCCAGATGGGATTCTGTATACCTCACGGGAAACACATTATTCTATTTTTAAAGCTGCTCGGATGTACAGAATGGAATGTGTGAAAATTGACACACACTGTGCCGGGGAGATTGATTGTGATGATTTCAAGGCCAAGATTCTTCGTAACAAAGACAAGCCAGCAATTGTAAATGTCAATATAGGCACAACCGTCAAAGGAGCTGTGGATGATCTTGATCTAGTAATAAAGACACTTGAAGAAGCAGGATTTTCACATGACAGATTCTACATCCACTGTGACGGAGCTTTATTTGGTCTCATGATGCCTTTTGTCAAACGAGCTCCAAAAGTTTCCTTTAAGAAGCCTATAGGCAGTGTAAGTGTTTCTGGCCACAAATTTGTAGGGTGCCCTATGCCTTGTGGTGTGCAAATTACAAGATTGGAGCACATCAATGTTCTCTCCAGGAATGTTGAGTACTTAGCTTCTAGGGATGCCACAATCATGGGCAGCCGAAATGGCCATGCTCCCATCTTCCTCTGGTACACCTTAAACCGAAAGGGATACCAGGGTTTCCAGAAAGAAGTACAGAAATGCTTGAGGAATGCACATTACCTGAAAGATCGGCTTAGAGATGCCAGGATCGGCGCGATGCTTAACGAGTTGAGCAGCACAGTTGTGTTTGAGCGGCCTCATGATGAGGAGTTTACTCGCAGGTGGCAACTTGCATGCCAAGGCAATATTGCTCATGTTGTGGTGATGCCAAACATTACAATTGAGAAGCTTGACAAATTTCTGGAGGAGTTTGTGCTGAAACGAGCCGAGTGGTTTAAAGATGGCAACTGTCAACCTCGCTGTATTGCATCAGATGTGGGTGAAAAGAGTTGCCTTTGTGCCTTACACAAAGAGAACTGA 1464 0.4372 MDRSVGIMGEELSVFRAVEPLSEDFDPTAVIKDPVPPVVENNGSVDAMTMMRDDKNKREIVLGRNVHTTCLEVTEPDADDEMTGDREAYMASVLARYRKSLMERTRHHLGYPYNLDFDYGALAQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYTSRETHYSIFKAARMYRMECVKIDTHCAGEIDCDDFKAKILRNKDKPAIVNVNIGTTVKGAVDDLDLVIKTLEEAGFSHDRFYIHCDGALFGLMMPFVKRAPKVSFKKPIGSVSVSGHKFVGCPMPCGVQITRLEHINVLSRNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYQGFQKEVQKCLRNAHYLKDRLRDARIGAMLNELSSTVVFERPHDEEFTRRWQLACQGNIAHVVVMPNITIEKLDKFLEEFVLKRAEWFKDGNCQPRCIASDVGEKSCLCALHKEN 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0602 487 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 309 330 IPR021115 GO:0016831
Prci3g0602 487 Gene3D Aspartate Aminotransferase, domain 1 368 456 IPR015422 GO:0003824
Prci3g0602 487 Gene3D - 124 367 IPR015421 GO:0003824
Prci3g0602 487 PANTHER - 47 485 - -
Prci3g0602 487 FunFam Serine decarboxylase 1 124 367 - -
Prci3g0602 487 Pfam Pyridoxal-dependent decarboxylase conserved domain 195 405 IPR002129 GO:0016830|GO:0019752|GO:0030170
Prci3g0602 487 SUPERFAMILY PLP-dependent transferases 104 452 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0602 Prci-Chr3 7488244 7491670 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0602 208 391 Calmodulin-binding Proteins AT1G65960 25.758 4.58e-09 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0602 K25193 - qsa:O6P43_012276 846.269