Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0589 ATGAACGAAGACGCAGGATCCTCCTCCCCCTCCTTCAGCTACGGGTGGAAATATCACGTGTTTTTGAGTTTCAGAGGTGAAGATACCCGCCACGGTTTCGCCGGAAATCTGTATCGCGACCTCCGTGAAAGGGGGATCCGCACATTCCTTGACGATCAGGGGATTAGAAAAGGGGAGCAGATTACCCAGACTCTTCTCAAAGTAATCCAAGAATCTAAGAATGCTATTGTTATTTTCTCTGAAAACTACGCGTTCTCAACATTTTGTCTGAAGGAACTGGTTCAGATCCTTGATTGCGTCAAGGGAGATGGTCGATTCGTTTGGCCCGTGTTTTACCATGTGGATCCATCTGATGTGCGATATCAGAAGGGATCCTATAAGGTTGCATTTGACAAGCATGAGGGAGACAAGGATGACAAGTTGGTGGAGCGCTGGAGATTGGCTTTGTCTCATGCGGCTGAATTGGTTGGCTGGTCTGTGAAACCAAGCACCGAATCATATGAATATGAGATTATAGAAAAAATAATTGAAGTGGTGTCCAAAGAGATCAATATTGGCCATTTCCATGTAGCTCCATTTCCAGTTGGACTTGAGTCTCGGGTCAAAGAAGTATGCTCACTTCTGAATGAACAGCCATATTGTGATGGAGCTAAAATGGTAGGAATTTACGGTCTTCCTGGTGTAGGTAAAACAACACTTGCGCGAGCTGTGTACAATGAGATGGCAAGTCAATTTAGACATGTATGCTTCCTGGACAATATTAGAGAAAAGCCAATCCAAGATCTTCCAATAACACTGCTTTCCAAAACTATTAGGGAGAAGGATATTGGGTTGGAACATGACAAAAGTGGAATTCCAATTATAAAAGATAGGCTTTGCAATATTAAGGTTCTTTTGATTCTTGATGATATAGACTCACCAGCGCAGTTACAAGCACTGGCAGGAGAACCTGACTGGTTTGGTTCTGGCAGTATAATCATCATAACAACAAAGGATAAAAAATTGGCTAAACAGCATGGAGGTTCCAGAATCTATGAGGTACAAGGATTAAACAAGGATGAAGCCCGAGAACTACTGATCTGGAATGCTTTTAGAAACAAAGAAGCAGATCCTGAGTATGAGGATGTTATAAATCGTGCTGTACATTATGCTGGTGGACTTCCATTGGTTTTGGAAACATTAGGTTCTAAATTGTGTGATCTAACGGTACATGAATGGGAATCTACTCTAGATATATATAAAAAAATTCCTGAAAAAACTGTTCTCAAGTTTCTTAAAGTAAGCTACGATAGCTTGGAAGAAGAACATCAACAAGTTTTTCTTGATATTGCATGTTTCTACAAAGGATGCAGGTCGAAATATGCCACAAATATGCTGTGGTGTAGCCATGGTTCTCGGCCAGAATCTTGCATTAGAGCATTGATTGATAAATGTCTTGTTAAAATTGATCAGGGTGGTCTCAAAATGCATGACTTGATTCAAGATATGGGTCGGGAAATTGTAAGGCAGCAATCACCATTAAAGCCAGGCAAACGCAGTAGGTTGTGGTCCTCGGAAGACATTCTTCATGTCTTACAAGAATGTATGGGAACTGATGAACTTGAAGCTATCAAGCTGGATTTTTCTAATGTTAGAGAGGTGTGTTGTAGTGAGGAAGCCTTCGATAAGATGAAAAGTCTCAAGGTACTCATCATCAACAATGCGAAGTTCTCTGGATCTCCTCCTAAATCTCTGCCAAGTAGTTTAAGGGTGCTGGATTGGATGGGTTATCCGTCAACAACATTGCCACCAAATTTTAATCCTGGAAATCTTGTCATACTCAACTTGCCCTATAGTCGTCTTGTTACACTGGAAAAACAATCATTCCAGTGGGGCAATTTGCGTTATTTGAATCTTGAGCACAACGAAAATTTGATGGAAGTACCTGATATGTCTAGAGCCTTGAACTTGGAGGAATTGCATGTTGCACATTGCAAGAATTTAACGACGATTGGTAGTTCCGTGGGACATCTTGCTAAACTTAAAGTGTTGGGAGCTCAATGGTGCACCAAACTCAAGAGTTTTATAGAAGATGGCATCAAATTGACATCTCTTGAAATTTTAAATCTCACAGGGTGCTCAGATTTTCAAATTTTTCCAGAAATATTAGAAAAAATGAATAGCATTAAAACTCTTGCATTGAGTGGCACTGCCATTGAAAAACTACCAGAGTCCATTGAGAAACTTGTTGGGCTTGAATGTTTATACCTACACAACTGCAGTAGTCTTCGTCAGATACCAGTGGATAGCTTTTGTAAGTTGACAAAACTTTTAAGATTGGAAGCTGGATCATGTGGGATATTTAACTGGTTAAAAGATCAAGAAGTAAAGTGGCCAGTGAATCTTGTATTCTCTCATGTCACAAGATTGCACCTGAACCAAAATAATATTTCAGATGAGCTTCTTGCTTTGATTCTTAGATGGTTTCCCGGATTACACGTTCTAGAGCTACGTGACAATAATATCACTGTCCTTCCTGCATTTATCCAAGAATGTAGCAGTCTGAAGCGACTTTATTTGGATAGGTGCAAACAACTTCGAGAAATTAGCGTGATTCCGCCAAACATTAAAGTATTATCAGCAGTAAACTGCATGTCATTGACTTCCATGACCCTGGATTTACTTAGCCAGGCTTTGCATGAGGCTGGGAACACAAAATTTATACTGCCTGGGGAATGGATCCCAGCATGCTTCCAATGCTCTAACATTGGAAGTTCTGTTGCTTTCAGGGTTCGCAAGAGATTTCCAGAAATTGCTGTTTGTGTTGTTTTTGATGTCAAAGGAAGAGGCTCTTGCCATTTTGAGTTTGAAATTCAAGTTCTCATCAATGACACTCACAATTTTGTTGTGAAGACTGATGTTTTAGATATAGAGACTGGCCATATATATCTGTTTGATGATTTGTGGCACCAAAGTCTGTTTGAGTTTAGGAGGGAACTTCCAGAGGAAAAATTCAATCATGTCCAGATATCGTGTAGTGCATACCATAAAGATGTCTCGGATGCCTTTGTACTTGTAAAGTGCATTGGAGTTTATGTCTACAACCTTGAAAGTTGCATGGATGATATCCTATTGGAAAATCTTAACCCTCCAAAGAGGATACTGGAGGATTGGTTTTGTGATGAAGATATGATGTCCTGGGTTTATAGTGACAGCAGTAGAGAAGACAGCTTGTATTACAAATACTATCATGCAATTGAAGCGTATGAGAGCTCTAGCAGCGATGTGAATTCATATGACATTAATAGTGACGGTTTGCAACAGCAACAGCATTTAGCTCATAATGAAGAGCAAATCCTAGAAAGCACTGAAAATGTCAGAAAAGCCGAAGAAGAAGATATTGTTGTCTACAGAGATAATGCTGATGAGGAAAAGGGCAGTAATACATTTGATACTGAATATGATCATTCATCTTTAAAAGGACAGTTAACTAAAGCTGAAAGTGTTCCATGTTCACCGGAAAGCATGTTAGAGTCTGATCAGGTTGCTTTTAAAGGAGTTAAAGAGACTGATTTGCAACGGCAGCAGCATTCAACTGGCATGCAAGAGAAAATCCTAGAGAGCTCAGGAAATGTTGGGAAAGCCAGAGACAAGGATATGCTTGTCTACAGAGACGATGCTAATAAGGAAAAGGACAGTAATACATTATCCGAGGATCCAATGGAATGGGAATATCAAGTTGCGTGCTGGAAAGATCGACTTGTGTTAAATGACCAAAGTACGGGGAGGGATGATAAAGGCTATGAAGGAACAGGATCTAAGCAACATAGAGATCGATGTGCATGTCTTGAAGATAGGCATGGCGCCAGCAAAATGACATCATTTCACCCAGTGAATCCTAGCCCTTGTGATCCAATGGAGGCACGGAGCTCATGTCTCACAGGAATCAACATCGAAAGGCACTGTTTCATGGTGTAA 3957 0.4033 MNEDAGSSSPSFSYGWKYHVFLSFRGEDTRHGFAGNLYRDLRERGIRTFLDDQGIRKGEQITQTLLKVIQESKNAIVIFSENYAFSTFCLKELVQILDCVKGDGRFVWPVFYHVDPSDVRYQKGSYKVAFDKHEGDKDDKLVERWRLALSHAAELVGWSVKPSTESYEYEIIEKIIEVVSKEINIGHFHVAPFPVGLESRVKEVCSLLNEQPYCDGAKMVGIYGLPGVGKTTLARAVYNEMASQFRHVCFLDNIREKPIQDLPITLLSKTIREKDIGLEHDKSGIPIIKDRLCNIKVLLILDDIDSPAQLQALAGEPDWFGSGSIIIITTKDKKLAKQHGGSRIYEVQGLNKDEARELLIWNAFRNKEADPEYEDVINRAVHYAGGLPLVLETLGSKLCDLTVHEWESTLDIYKKIPEKTVLKFLKVSYDSLEEEHQQVFLDIACFYKGCRSKYATNMLWCSHGSRPESCIRALIDKCLVKIDQGGLKMHDLIQDMGREIVRQQSPLKPGKRSRLWSSEDILHVLQECMGTDELEAIKLDFSNVREVCCSEEAFDKMKSLKVLIINNAKFSGSPPKSLPSSLRVLDWMGYPSTTLPPNFNPGNLVILNLPYSRLVTLEKQSFQWGNLRYLNLEHNENLMEVPDMSRALNLEELHVAHCKNLTTIGSSVGHLAKLKVLGAQWCTKLKSFIEDGIKLTSLEILNLTGCSDFQIFPEILEKMNSIKTLALSGTAIEKLPESIEKLVGLECLYLHNCSSLRQIPVDSFCKLTKLLRLEAGSCGIFNWLKDQEVKWPVNLVFSHVTRLHLNQNNISDELLALILRWFPGLHVLELRDNNITVLPAFIQECSSLKRLYLDRCKQLREISVIPPNIKVLSAVNCMSLTSMTLDLLSQALHEAGNTKFILPGEWIPACFQCSNIGSSVAFRVRKRFPEIAVCVVFDVKGRGSCHFEFEIQVLINDTHNFVVKTDVLDIETGHIYLFDDLWHQSLFEFRRELPEEKFNHVQISCSAYHKDVSDAFVLVKCIGVYVYNLESCMDDILLENLNPPKRILEDWFCDEDMMSWVYSDSSREDSLYYKYYHAIEAYESSSSDVNSYDINSDGLQQQQHLAHNEEQILESTENVRKAEEEDIVVYRDNADEEKGSNTFDTEYDHSSLKGQLTKAESVPCSPESMLESDQVAFKGVKETDLQRQQHSTGMQEKILESSGNVGKARDKDMLVYRDDANKEKDSNTLSEDPMEWEYQVACWKDRLVLNDQSTGRDDKGYEGTGSKQHRDRCACLEDRHGASKMTSFHPVNPSPCDPMEARSSCLTGINIERHCFMV 1318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0589 1318 Gene3D - 181 342 IPR027417 -
Prci3g0589 1318 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 185 - -
Prci3g0589 1318 Pfam TIR domain 17 179 IPR000157 GO:0007165
Prci3g0589 1318 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 443 IPR027417 -
Prci3g0589 1318 ProSiteProfiles TIR domain profile. 16 183 IPR000157 GO:0007165
Prci3g0589 1318 Gene3D - 429 500 IPR036388 -
Prci3g0589 1318 SUPERFAMILY L domain-like 539 886 - -
Prci3g0589 1318 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 158 IPR035897 -
Prci3g0589 1318 Gene3D - 14 180 IPR035897 -
Prci3g0589 1318 CDD AAA 222 332 - -
Prci3g0589 1318 PRINTS Disease resistance protein signature 693 709 - -
Prci3g0589 1318 PRINTS Disease resistance protein signature 219 234 - -
Prci3g0589 1318 PRINTS Disease resistance protein signature 384 398 - -
Prci3g0589 1318 PRINTS Disease resistance protein signature 291 305 - -
Prci3g0589 1318 Gene3D - 349 428 IPR042197 -
Prci3g0589 1318 Pfam NB-ARC domain 200 415 IPR002182 GO:0043531
Prci3g0589 1318 Gene3D Ribonuclease Inhibitor 525 707 IPR032675 -
Prci3g0589 1318 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 763 IPR044974 GO:0006952
Prci3g0589 1318 MobiDBLite consensus disorder prediction 1185 1204 - -
Prci3g0589 1318 SMART till_3 17 155 IPR000157 GO:0007165
Prci3g0589 1318 SUPERFAMILY "Winged helix" DNA-binding domain 420 526 IPR036390 -
Prci3g0589 1318 SMART AAA_5 216 350 IPR003593 GO:0016887
Prci3g0589 1318 Gene3D Ribonuclease Inhibitor 708 895 IPR032675 -
Prci3g0589 1318 Coils Coil 1105 1133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0589 Prci-Chr3 7257990 7274186 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0589 195 893 WRKY Transcription Factor Family AT5G45050 31.284 1.99e-82 294