Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0588 ATGAACGAAGACGCAGGATCCTCCTCCCCCTCCTTCAGCTACGGGTGGAAATATCACGTGTTTTTGAGTTTCAGAGGTGAAGATACCCGCCACGGTTTCGCCGGAAATCTGTATCGCGACCTCCGTGAAAGGGGGATCCGCACATTCCTTGACGATCAGGGGATTAGAAAAGGGGAGCAGATTACCCAGACTCTTCTCAAAGAACTGGTTCAGATCCTTGATTGCGTCAAGGGAGATGGTCGATTCGTTTGGCCCGTGTTTTACCATGTGGATCCATCTGATGTGCGATATCAGAAGGGATCCTATAAGGTTGCATTTGACAAGCATGAGGGAGACAAGGATGACAAGTTGGTGGAGCGCTGGAGATTGGCTTTGTCTCATGCGGCTGAATTGGTTGGCTGGTCTGTGAAACCAAGCACCGAATCATATGAATATGAGATTATAGAAAAAATAATTGAAGTGGTGTCCAAAGAGATCAATATTGGCCATTTCCATGTAGCTCCATTTCCAGTTGGACTTGAGTCTCGGGTCAAAGAAGTATGCTCACTTCTGAATGAACAGCCATATTGTGATGGAGCTAAAATGGTAGGAATTTACGGTCTTCCTGGTGTAGGTAAAACAACACTTGCGCGAGCTGTGTACAATGAGATGGCAAGTCAATTTAGACATGTATGCTTCCTGGACAATATTAGAGAAAAGCCAATCCAAGATCTTCCAATAACACTGCTTTCCAAAACTATTAGGGAGAAGGATATTGGGTTGGAACATGACAAAAGTGGAATTCCAATTATAAAAGATAGGCTTTGCAATATTAAGGTTCTTTTGATTCTTGATGATATAGACTCACCAGCGCAGTTACAAGCACTGGCAGGAGAACCTGACTGGTTTGGTTCTGGCAGTATAATCATCATAACAACAAAGGATAAAAAATTGGCTAAACAGCATGGAGGTTCCAGAATCTATGAGGTACAAGGATTAAACAAGGATGAAGCCCGAGAACTACTGATCTGGAATGCTTTTAGAAACAAAGAAGCAGATCCTGAGTATGAGGATGTTATAAATCGTGCTGTACATTATGCTGGTGGACTTCCATTGGTTTTGGAAACATTAGGTTCTAAATTGTGTGATCTAACGGTACATGAATGGGAATCTACTCTAGATATATATAAAAAAATTCCTGAAAAAACTGTTCTCAAGTTTCTTAAAGTAAGCTACGATAGCTTGGAAGAAGAACATCAACAAGTTTTTCTTGATATTGCATGTTTCTACAAAGGATGCAGGTCGAAATATGCCACAAATATGCTGTGGTGTAGCCATGGTTCTCGGCCAGAATCTTGCATTAGAGCATTGATTGATAAATGTCTTGTTAAAATTGATCAGGGTGGTCTCAAAATGCATGACTTGATTCAAGATATGGGTCGGGAAATTGTAAGGCAGCAATCACCATTAAAGCCAGGCAAACGCAGTAGGTTGTGGTCCTCGGAAGACATTCTTCATGTCTTACAAGAATGTATGGGAACTGATGAACTTGAAGCTATCAAGCTGGATTTTTCTAATGTTAGAGAGGTGTGTTGTAGTGAGGAAGCCTTCGATAAGATGAAAAGTCTCAAGGTACTCATCATCAACAATGCGAAGTTCTCTGGATCTCCTCCTAAATCTCTGCCAAGTAGTTTAAGGGTGCTGGATTGGATGGGTTATCCGTCAACAACATTGCCACCAAATTTTAATCCTGGAAATCTTGTCATACTCAACTTGCCCTATAGTCGTCTTGTTACACTGGAAAAACAATCATTCCAGTGGGGCAATTTGCGTTATTTGAATCTTGAGCACAACGAAAATTTGATGGAAGTACCTGATATGTCTAGAGCCTTGAACTTGGAGGAATTGCATGTTGCACATTGCAAGAATTTAACGACGATTGGTAGTTCCGTGGGACATCTTGCTAAACTTAAAGTGTTGGGAGCTCAATGGTGCACCAAACTCAAGAGTTTTATAGAAGATGGCATCAAATTGACATCTCTTGAAATTTTAAATCTCACAGGGTGCTCAGATTTTCAAATTTTTCCAGAAATATTAGAAAAAATGAATAGCATTAAAACTCTTGCATTGAGTGGCACTGCCATTGAAAAACTACCAGAGTCCATTGAGAAACTTGTTGGGCTTGAATGTTTATACCTACACAACTGCAGTAGTCTTCGTCAGATACCAGTGGATAGCTTTTGTAAGTTGACAAAACTTTTAAGATTGGAAGCTGGATCATGTGGGATATTTAACTGGTTAAAAGATCAAGAAGTAAAGTGGCCAGTGAATCTTGTATTCTCTCATGTCACAAGATTGCACCTGAACCAAAATAATATTTCAGATGAGCTTCTTGCTTTGATTCTTAGATGGTTTCCCGGATTACACGTTCTAGAGCTACGTGACAATAATATCACTGTCCTTCCTGCATTTATCCAAGAATGTAGCAGTCTGAAGCGACTTTATTTGGATAGGTGCAAACAACTTCGAGAAATTAGCGTGATTCCGCCAAACATTAAAGTATTATCAGCAGTAAACTGCATGTCATTGACTTCCATGACCCTGGATTTACTTAGCCAGGCTTTGCATGAGGCTGGGAACACAAAATTTATACTGCCTGGGGAATGGATCCCAGCATGCTTCCAATGCTCTAACATTGGAAGTTCTGTTGCTTTCAGGGTTCGCAAGAGATTTCCAGAAATTGCTGTTTGTGTTGTTTTTGATGTCAAAGGAAGAGGCTCTTGCCATTTTGAGTTTGAAATTCAAGTTCTCATCAATGACACTCACAATTTTGTTGTGAAGACTGATGTTTTAGATATAGAGACTGGCCATATATATCTGTTTGATGATTTGTGGCACCAAAGTCTGTTTGAGTTTAGGAGGGAACTTCCAGAGGAAAAATTCAATCATGTCCAGATATCGTGTAGTGCATACCATAAAGATGTCTCGGATGCCTTTGTACTTGTAAAGTGCATTGGAGTTTATGTCTACAACCTTGAAAGTTGCATGGATGATATCCTATTGGAAAATCTTAACCCTCCAAAGAGGATACTGGAGGATTGGTTTTGTGATGAAGATATGATGTCCTGGGTTTATAGTGACAGCAGTAGAGAAGACAGCTTGTATTACAAATACTATCATGCAATTGAAGCGTATGAGAGCTCTAGCAGCGATGTGAATTCATATGACATTAATAGTGACGGTTTGCAACAGCAACAGCATTTAGCTCATAATGAAGAGCAAATCCTAGAAAGCACTGAAAATGTCAGAAAAGCCGAAGAAGAAGATATTGTTGTCTACAGAGATAATGCTGATGAGGAAAAGGGCAGTAATACATTTGATACTGAATATGATCATTCATCTTTAAAAGGACAGTTAACTAAAGCTGAAAGTGTTCCATGTTCACCGGAAAGCATGTTAGAGTCTGATCAGGTTGCTTTTAAAGGAGTTAAAGAGACTGATTTGCAACGGCAGCAGCATTCAACTGGCATGCAAGAGAAAATCCTAGAGAGCTCAGGAAATGTTGGGAAAGCCAGAGACAAGGATATGCTTGTCTACAGAGACGATGCTAATAAGGAAAAGGACAGTAATACATTATCCGAGGATCCAATGGAATGGGAATATCAAGTTGCGTGCTGGAAAGATCGACTTGTGTTAAATGACCAAAGTACGGGGAGGGATGATAAAGGCTATGAAGGAACAGGATCTAAGCAACATAGAGATCGATGTGCATGTCTTGAAGATAGGCATGGCGCCAGCAAAATGACATCATTTCACCCAGTGAATCCTAGCCCTTGTGATCCAATGGAGGCACGGAGCTCATGTCTCACAGGAATCAACATCGAAAGGCACTGTTTCATGGTGTAA 3885 0.4046 MNEDAGSSSPSFSYGWKYHVFLSFRGEDTRHGFAGNLYRDLRERGIRTFLDDQGIRKGEQITQTLLKELVQILDCVKGDGRFVWPVFYHVDPSDVRYQKGSYKVAFDKHEGDKDDKLVERWRLALSHAAELVGWSVKPSTESYEYEIIEKIIEVVSKEINIGHFHVAPFPVGLESRVKEVCSLLNEQPYCDGAKMVGIYGLPGVGKTTLARAVYNEMASQFRHVCFLDNIREKPIQDLPITLLSKTIREKDIGLEHDKSGIPIIKDRLCNIKVLLILDDIDSPAQLQALAGEPDWFGSGSIIIITTKDKKLAKQHGGSRIYEVQGLNKDEARELLIWNAFRNKEADPEYEDVINRAVHYAGGLPLVLETLGSKLCDLTVHEWESTLDIYKKIPEKTVLKFLKVSYDSLEEEHQQVFLDIACFYKGCRSKYATNMLWCSHGSRPESCIRALIDKCLVKIDQGGLKMHDLIQDMGREIVRQQSPLKPGKRSRLWSSEDILHVLQECMGTDELEAIKLDFSNVREVCCSEEAFDKMKSLKVLIINNAKFSGSPPKSLPSSLRVLDWMGYPSTTLPPNFNPGNLVILNLPYSRLVTLEKQSFQWGNLRYLNLEHNENLMEVPDMSRALNLEELHVAHCKNLTTIGSSVGHLAKLKVLGAQWCTKLKSFIEDGIKLTSLEILNLTGCSDFQIFPEILEKMNSIKTLALSGTAIEKLPESIEKLVGLECLYLHNCSSLRQIPVDSFCKLTKLLRLEAGSCGIFNWLKDQEVKWPVNLVFSHVTRLHLNQNNISDELLALILRWFPGLHVLELRDNNITVLPAFIQECSSLKRLYLDRCKQLREISVIPPNIKVLSAVNCMSLTSMTLDLLSQALHEAGNTKFILPGEWIPACFQCSNIGSSVAFRVRKRFPEIAVCVVFDVKGRGSCHFEFEIQVLINDTHNFVVKTDVLDIETGHIYLFDDLWHQSLFEFRRELPEEKFNHVQISCSAYHKDVSDAFVLVKCIGVYVYNLESCMDDILLENLNPPKRILEDWFCDEDMMSWVYSDSSREDSLYYKYYHAIEAYESSSSDVNSYDINSDGLQQQQHLAHNEEQILESTENVRKAEEEDIVVYRDNADEEKGSNTFDTEYDHSSLKGQLTKAESVPCSPESMLESDQVAFKGVKETDLQRQQHSTGMQEKILESSGNVGKARDKDMLVYRDDANKEKDSNTLSEDPMEWEYQVACWKDRLVLNDQSTGRDDKGYEGTGSKQHRDRCACLEDRHGASKMTSFHPVNPSPCDPMEARSSCLTGINIERHCFMV 1294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0588 1294 Pfam NB-ARC domain 176 391 IPR002182 GO:0043531
Prci3g0588 1294 Gene3D - 325 404 IPR042197 -
Prci3g0588 1294 PRINTS Disease resistance protein signature 195 210 - -
Prci3g0588 1294 PRINTS Disease resistance protein signature 669 685 - -
Prci3g0588 1294 PRINTS Disease resistance protein signature 267 281 - -
Prci3g0588 1294 PRINTS Disease resistance protein signature 360 374 - -
Prci3g0588 1294 Gene3D Ribonuclease Inhibitor 498 683 IPR032675 -
Prci3g0588 1294 Gene3D - 66 156 IPR035897 -
Prci3g0588 1294 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 739 IPR044974 GO:0006952
Prci3g0588 1294 CDD AAA 198 308 - -
Prci3g0588 1294 Gene3D - 405 476 IPR036388 -
Prci3g0588 1294 SMART till_3 17 131 IPR000157 GO:0007165
Prci3g0588 1294 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 134 IPR035897 -
Prci3g0588 1294 Gene3D Ribonuclease Inhibitor 684 871 IPR032675 -
Prci3g0588 1294 Gene3D - 157 318 IPR027417 -
Prci3g0588 1294 ProSiteProfiles TIR domain profile. 16 159 IPR000157 GO:0007165
Prci3g0588 1294 MobiDBLite consensus disorder prediction 1161 1180 - -
Prci3g0588 1294 Gene3D - 11 65 IPR035897 -
Prci3g0588 1294 SMART AAA_5 192 326 IPR003593 GO:0016887
Prci3g0588 1294 Pfam TIR domain 65 155 IPR000157 GO:0007165
Prci3g0588 1294 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 162 419 IPR027417 -
Prci3g0588 1294 Coils Coil 1081 1109 - -
Prci3g0588 1294 SUPERFAMILY L domain-like 515 862 - -
Prci3g0588 1294 SUPERFAMILY "Winged helix" DNA-binding domain 396 502 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0588 Prci-Chr3 7257990 7274186 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0588 171 869 WRKY Transcription Factor Family AT5G45050 31.284 1.48e-82 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0588 - - pcin:129306650 2588.53