Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0587 ATGAACGAAGACGCAGGATCCTCCTCCCCCTCCTTCAGCTACGGGTGGAAATATCACGTGTTTTTGAGTTTCAGAGGTGAAGATACCCGCCACGGTTTCGCCGGAAATCTGTATCGCGACCTCCGTGAAAGGGGGATCCGCACATTCCTTGACGATCAGGGGATTAGAAAAGGGGAGCAGATTACCCAGACTCTTCTCAAAATCCTTGATTGCGTCAAGGGAGATGGTCGATTCGTTTGGCCCGTGTTTTACCATGTGGATCCATCTGATGTGCGATATCAGAAGGGATCCTATAAGGTTGCATTTGACAAGCATGAGGGAGACAAGGATGACAAGTTGGTGGAGCGCTGGAGATTGGCTTTGTCTCATGCGGCTGAATTGGTTGGCTGGTCTGTGAAACCAAGCACCGAATCATATGAATATGAGATTATAGAAAAAATAATTGAAGTGGTGTCCAAAGAGATCAATATTGGCCATTTCCATGTAGCTCCATTTCCAGTTGGACTTGAGTCTCGGGTCAAAGAAGTATGCTCACTTCTGAATGAACAGCCATATTGTGATGGAGCTAAAATGGTAGGAATTTACGGTCTTCCTGGTGTAGGTAAAACAACACTTGCGCGAGCTGTGTACAATGAGATGGCAAGTCAATTTAGACATGTATGCTTCCTGGACAATATTAGAGAAAAGCCAATCCAAGATCTTCCAATAACACTGCTTTCCAAAACTATTAGGGAGAAGGATATTGGGTTGGAACATGACAAAAGTGGAATTCCAATTATAAAAGATAGGCTTTGCAATATTAAGGTTCTTTTGATTCTTGATGATATAGACTCACCAGCGCAGTTACAAGCACTGGCAGGAGAACCTGACTGGTTTGGTTCTGGCAGTATAATCATCATAACAACAAAGGATAAAAAATTGGCTAAACAGCATGGAGGTTCCAGAATCTATGAGGTACAAGGATTAAACAAGGATGAAGCCCGAGAACTACTGATCTGGAATGCTTTTAGAAACAAAGAAGCAGATCCTGAGTATGAGGATGTTATAAATCGTGCTGTACATTATGCTGGTGGACTTCCATTGGTTTTGGAAACATTAGGTTCTAAATTGTGTGATCTAACGGTACATGAATGGGAATCTACTCTAGATATATATAAAAAAATTCCTGAAAAAACTGTTCTCAAGTTTCTTAAAGTAAGCTACGATAGCTTGGAAGAAGAACATCAACAAGTTTTTCTTGATATTGCATGTTTCTACAAAGGATGCAGGTCGAAATATGCCACAAATATGCTGTGGTGTAGCCATGGTTCTCGGCCAGAATCTTGCATTAGAGCATTGATTGATAAATGTCTTGTTAAAATTGATCAGGGTGGTCTCAAAATGCATGACTTGATTCAAGATATGGGTCGGGAAATTGTAAGGCAGCAATCACCATTAAAGCCAGGCAAACGCAGTAGGTTGTGGTCCTCGGAAGACATTCTTCATGTCTTACAAGAATGTATGGGAACTGATGAACTTGAAGCTATCAAGCTGGATTTTTCTAATGTTAGAGAGGTGTGTTGTAGTGAGGAAGCCTTCGATAAGATGAAAAGTCTCAAGGTACTCATCATCAACAATGCGAAGTTCTCTGGATCTCCTCCTAAATCTCTGCCAAGTAGTTTAAGGGTGCTGGATTGGATGGGTTATCCGTCAACAACATTGCCACCAAATTTTAATCCTGGAAATCTTGTCATACTCAACTTGCCCTATAGTCGTCTTGTTACACTGGAAAAACAATCATTCCAGTGGGGCAATTTGCGTTATTTGAATCTTGAGCACAACGAAAATTTGATGGAAGTACCTGATATGTCTAGAGCCTTGAACTTGGAGGAATTGCATGTTGCACATTGCAAGAATTTAACGACGATTGGTAGTTCCGTGGGACATCTTGCTAAACTTAAAGTGTTGGGAGCTCAATGGTGCACCAAACTCAAGAGTTTTATAGAAGATGGCATCAAATTGACATCTCTTGAAATTTTAAATCTCACAGGGTGCTCAGATTTTCAAATTTTTCCAGAAATATTAGAAAAAATGAATAGCATTAAAACTCTTGCATTGAGTGGCACTGCCATTGAAAAACTACCAGAGTCCATTGAGAAACTTGTTGGGCTTGAATGTTTATACCTACACAACTGCAGTAGTCTTCGTCAGATACCAGTGGATAGCTTTTGTAAGTTGACAAAACTTTTAAGATTGGAAGCTGGATCATGTGGGATATTTAACTGGTTAAAAGATCAAGAAGTAAAGTGGCCAGTGAATCTTGTATTCTCTCATGTCACAAGATTGCACCTGAACCAAAATAATATTTCAGATGAGCTTCTTGCTTTGATTCTTAGATGGTTTCCCGGATTACACGTTCTAGAGCTACGTGACAATAATATCACTGTCCTTCCTGCATTTATCCAAGAATGTAGCAGTCTGAAGCGACTTTATTTGGATAGGTGCAAACAACTTCGAGAAATTAGCGTGATTCCGCCAAACATTAAAGTATTATCAGCAGTAAACTGCATGTCATTGACTTCCATGACCCTGGATTTACTTAGCCAGGCTTTGCATGAGGCTGGGAACACAAAATTTATACTGCCTGGGGAATGGATCCCAGCATGCTTCCAATGCTCTAACATTGGAAGTTCTGTTGCTTTCAGGGTTCGCAAGAGATTTCCAGAAATTGCTGTTTGTGTTGTTTTTGATGTCAAAGGAAGAGGCTCTTGCCATTTTGAGTTTGAAATTCAAGTTCTCATCAATGACACTCACAATTTTGTTGTGAAGACTGATGTTTTAGATATAGAGACTGGCCATATATATCTGTTTGATGATTTGTGGCACCAAAGTCTGTTTGAGTTTAGGAGGGAACTTCCAGAGGAAAAATTCAATCATGTCCAGATATCGTGTAGTGCATACCATAAAGATGTCTCGGATGCCTTTGTACTTGTAAAGTGCATTGGAGTTTATGTCTACAACCTTGAAAGTTGCATGGATGATATCCTATTGGAAAATCTTAACCCTCCAAAGAGGATACTGGAGGATTGGTTTTGTGATGAAGATATGATGTCCTGGGTTTATAGTGACAGCAGTAGAGAAGACAGCTTGTATTACAAATACTATCATGCAATTGAAGCGTATGAGAGCTCTAGCAGCGATGTGAATTCATATGACATTAATAGTGACGGTTTGCAACAGCAACAGCATTTAGCTCATAATGAAGAGCAAATCCTAGAAAGCACTGAAAATGTCAGAAAAGCCGAAGAAGAAGATATTGTTGTCTACAGAGATAATGCTGATGAGGAAAAGGGCAGTAATACATTTGATACTGAATATGATCATTCATCTTTAAAAGGACAGTTAACTAAAGCTGAAAGTGTTCCATGTTCACCGGAAAGCATGTTAGAGTCTGATCAGGTTGCTTTTAAAGGAGTTAAAGAGACTGATTTGCAACGGCAGCAGCATTCAACTGGCATGCAAGAGAAAATCCTAGAGAGCTCAGGAAATGTTGGGAAAGCCAGAGACAAGGATATGCTTGTCTACAGAGACGATGCTAATAAGGAAAAGGACAGTAATACATTATCCGAGGATCCAATGGAATGGGAATATCAAGTTGCGTGCTGGAAAGATCGACTTGTGTTAAATGACCAAAGTACGGGGAGGGATGATAAAGGCTATGAAGGAACAGGATCTAAGCAACATAGAGATCGATGTGCATGTCTTGAAGATAGGCATGGCGCCAGCAAAATGACATCATTTCACCCAGTGAATCCTAGCCCTTGTGATCCAATGGAGGCACGGAGCTCATGTCTCACAGGAATCAACATCGAAAGGCACTGTTTCATGGTGTAA 3873 0.4043 MNEDAGSSSPSFSYGWKYHVFLSFRGEDTRHGFAGNLYRDLRERGIRTFLDDQGIRKGEQITQTLLKILDCVKGDGRFVWPVFYHVDPSDVRYQKGSYKVAFDKHEGDKDDKLVERWRLALSHAAELVGWSVKPSTESYEYEIIEKIIEVVSKEINIGHFHVAPFPVGLESRVKEVCSLLNEQPYCDGAKMVGIYGLPGVGKTTLARAVYNEMASQFRHVCFLDNIREKPIQDLPITLLSKTIREKDIGLEHDKSGIPIIKDRLCNIKVLLILDDIDSPAQLQALAGEPDWFGSGSIIIITTKDKKLAKQHGGSRIYEVQGLNKDEARELLIWNAFRNKEADPEYEDVINRAVHYAGGLPLVLETLGSKLCDLTVHEWESTLDIYKKIPEKTVLKFLKVSYDSLEEEHQQVFLDIACFYKGCRSKYATNMLWCSHGSRPESCIRALIDKCLVKIDQGGLKMHDLIQDMGREIVRQQSPLKPGKRSRLWSSEDILHVLQECMGTDELEAIKLDFSNVREVCCSEEAFDKMKSLKVLIINNAKFSGSPPKSLPSSLRVLDWMGYPSTTLPPNFNPGNLVILNLPYSRLVTLEKQSFQWGNLRYLNLEHNENLMEVPDMSRALNLEELHVAHCKNLTTIGSSVGHLAKLKVLGAQWCTKLKSFIEDGIKLTSLEILNLTGCSDFQIFPEILEKMNSIKTLALSGTAIEKLPESIEKLVGLECLYLHNCSSLRQIPVDSFCKLTKLLRLEAGSCGIFNWLKDQEVKWPVNLVFSHVTRLHLNQNNISDELLALILRWFPGLHVLELRDNNITVLPAFIQECSSLKRLYLDRCKQLREISVIPPNIKVLSAVNCMSLTSMTLDLLSQALHEAGNTKFILPGEWIPACFQCSNIGSSVAFRVRKRFPEIAVCVVFDVKGRGSCHFEFEIQVLINDTHNFVVKTDVLDIETGHIYLFDDLWHQSLFEFRRELPEEKFNHVQISCSAYHKDVSDAFVLVKCIGVYVYNLESCMDDILLENLNPPKRILEDWFCDEDMMSWVYSDSSREDSLYYKYYHAIEAYESSSSDVNSYDINSDGLQQQQHLAHNEEQILESTENVRKAEEEDIVVYRDNADEEKGSNTFDTEYDHSSLKGQLTKAESVPCSPESMLESDQVAFKGVKETDLQRQQHSTGMQEKILESSGNVGKARDKDMLVYRDDANKEKDSNTLSEDPMEWEYQVACWKDRLVLNDQSTGRDDKGYEGTGSKQHRDRCACLEDRHGASKMTSFHPVNPSPCDPMEARSSCLTGINIERHCFMV 1290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0587 1290 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 735 IPR044974 GO:0006952
Prci3g0587 1290 SMART AAA_5 188 322 IPR003593 GO:0016887
Prci3g0587 1290 Pfam TIR domain 17 68 IPR000157 GO:0007165
Prci3g0587 1290 Gene3D - 67 153 IPR035897 -
Prci3g0587 1290 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 130 IPR035897 -
Prci3g0587 1290 Pfam NB-ARC domain 172 387 IPR002182 GO:0043531
Prci3g0587 1290 Gene3D - 321 400 IPR042197 -
Prci3g0587 1290 SMART till_3 17 127 IPR000157 GO:0007165
Prci3g0587 1290 CDD AAA 194 304 - -
Prci3g0587 1290 Gene3D Ribonuclease Inhibitor 494 679 IPR032675 -
Prci3g0587 1290 PRINTS Disease resistance protein signature 263 277 - -
Prci3g0587 1290 PRINTS Disease resistance protein signature 191 206 - -
Prci3g0587 1290 PRINTS Disease resistance protein signature 356 370 - -
Prci3g0587 1290 PRINTS Disease resistance protein signature 665 681 - -
Prci3g0587 1290 ProSiteProfiles TIR domain profile. 16 155 IPR000157 GO:0007165
Prci3g0587 1290 Gene3D - 154 314 IPR027417 -
Prci3g0587 1290 MobiDBLite consensus disorder prediction 1157 1176 - -
Prci3g0587 1290 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 415 IPR027417 -
Prci3g0587 1290 Gene3D Ribonuclease Inhibitor 680 867 IPR032675 -
Prci3g0587 1290 Coils Coil 1077 1105 - -
Prci3g0587 1290 SUPERFAMILY L domain-like 511 858 - -
Prci3g0587 1290 SUPERFAMILY "Winged helix" DNA-binding domain 392 498 IPR036390 -
Prci3g0587 1290 Gene3D - 401 472 IPR036388 -
Prci3g0587 1290 Gene3D - 1 66 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0587 Prci-Chr3 7257990 7274186 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0587 167 865 WRKY Transcription Factor Family AT5G45050 31.284 1.55e-82 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0587 - - pcin:129306650 2580.05