Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0568 ATGAGTTCTCCGGTTGAAGTGGGCAGTCAAGGTGACAAGCCCCAGAAGGAGGGGCTTAAATGCGGCCTTAAAGAACCAACGTTCTTGTATGGTGACTTGGATCTGTATGTATTAGAAGCAAAAAATCTCCCAAATTTGGATCTTTCTTCTGAAACAATGAGAAAATGTTTCACTATGGGTAATACTTGTACCCCTCCCTTCATGAAAGCACGCAGGATAAGCACTGGGAAATATCATGTAGATACTAGCGATCCCTATGTCTCTGTCGTTCTGGCAGGGGCTACTGTAGCTCAAACTCGAGTAGTTCGTAATAATGAGCATCCTTCATGGGATGAGCATTTTATTGTTCCAGTGGCTCATCCTGCTGAGGAAGTGGAGTTCATTGTGAAAGATAATGATGCTCTTGGGGCTGAAATCATTGGAGCTGTAGAGATACCAATTCAAAATATTTTGTCTGGAAATACTATTAATGATTGGTTTCCAATAACTGGTGGGTTCTCAATTTGCTCAAAAGGTACTCCTGAGTTACATATCTCTATTCAGTATCAGCCATTTGGAGCAAACCCTTCAGACAAATATGGCATTGGAGCTGCAGCAGATCATCCAGGTATTCCTAACACATATTTTCCTCCTCGGAAAGGAGGGAAAGTGACTCTGTATCAAGATGCACATGTACCAGATGGTAAACTACCTAAAATTTCACTTGAGGAGGGAAAAGTCTTTCAGCAGGGTAAATGTTGGGAGGATATTTGCCATGCAATTTTGGAAGCTCATGAGCTGGTATACATTATAGGATGGTCTGTTTATCACCCTGTAAAGCTTGTCAGAGAACCAACAAGACCCGTACCTTCTGGAGGAGAGCTTTCACTTGGAGAGTTGTTGAAATATAAGTCACAAGAAGGTGTCCGCGTGGTTATGCTGATCTGGGATGACAAAACTTCGCATGACAATTTTTTTTTGAAAACAGATGGAGTCATGCAGACCCATGATGAAGAAACTAAGAAATTTTTTAAACACTCCACTGTTCATTGTGTTCTTGCTCCGCGTTATGCAAGCAATAAGCTCAGTATTTTCAAGCAACAGGTTGTTGGAACCCTTTTTACGCATCATCAGAAGTGTGTGCTTGTTGACAGTTATGCATGTGAGGATAAACGGAAAATAACTGCTTTTATAGGTGGTCTAGATCTATGTGATGGCAGATATGATACTCCTGACCACCGGCTCTTTGTTGATTTAGACACTGTCTTTCAAAATGATATTCATAATCCGGTATTCCCTTCAAATACTGGAGTACCAAGGGAACCATGGCATGACCTACATTGTAAAGTTGAGGGTCCAGCTGCATACGATTTATTGACCAATTTTGAACAAAGATGGAGGAAAGCCAAAAAGTGGCGTGAATTCAAGCTAAAAAGGGTGGCAAATTGGCATGATGATGCTTTGCTAAGGTTAGACCGTATTTCATGGATTCTAACTCCATCATCTGGCGCCGCTGGCGACCAAGTTGTTCAGGTAACTGAAGAAGATGATTCGGAAAGCTGGAATGTGCAGGTGTTTCGTTCCATAGATTCAGGATCTGTCAAGGGTTTTCCAAAGGATATGGACCAAGCTAAGGCTCAGCATCTTCTCTGCGGAAAGAACTTAAAAGTAGACAAAAGTATCCATACCGCTTATGTAAAAGCAATTAGATCGGCCCAACACTTCATATATATAGAGAATCAATATTTTCTGGGATCCTCGTTTCATTGGCCTTCATATCAACATGCAGGTGCTGATAACTTGGTTCCAATAGAGTTAGCTTTGAAAATTGCCAACAAGATCAATGCAAATGAACGATTTTCCGTCTACATAGTCATACCAATGTTTCCAGAGGGGCCTCCAACTAGTAGTGCTGTGCAGGAAATCTTGTTCTGGCAGGGACAAACAATGTCTATGATGTACGGCATGATTGCAGATGCCCTTAAAAGAAACGGTCTTTCTGATCAATATCATCCTCAAGATTATCTCAACTTTTATTGCCTTGGAAAGCGTGAACCTGAATCCAGTACAAGTTCAATGGCTATGCAAACAGCTGACCGTGCTCTGGCATCGGTTGGCAAATATAGACGTTTTATGATTTATGTTCATGCCAAAGGAATGATAGTTGATGATCAATTTGTAATCCTGGGATCTGCAAATATTAACCAAAGATCCTTGGATGGTTCAAGGGACACAGAAATTGCTATGGGTGCCTATCAGCCTCATTACACATGGGCTAGAAAATATTCTCATCCACATGGTCAGGTTTATGGTTACAGGATGTCTCTCTGGGCTGAGCACCTCAACGGTCTTGAGGATACTTTCAAGGAACCGGACAGCCTCGAATGTGTTCGACGTGTTAATGTAATTGCCAAGAGCAACTGGGACGCATATGTGTCTGAGGAAGAGAAAGAGATGATGGGACACCTGATGCTGTACCCCGTTCAGATTGGCAATGATGGAAGAGTTAGTGCCTTGAAGGATTGGGAAAACTTCCCCGATGTTGGTGGTAAAATTCTTGGATCACCCAACTCTCTTCCTGATACACTAACCACATAA 2577 0.4195 MSSPVEVGSQGDKPQKEGLKCGLKEPTFLYGDLDLYVLEAKNLPNLDLSSETMRKCFTMGNTCTPPFMKARRISTGKYHVDTSDPYVSVVLAGATVAQTRVVRNNEHPSWDEHFIVPVAHPAEEVEFIVKDNDALGAEIIGAVEIPIQNILSGNTINDWFPITGGFSICSKGTPELHISIQYQPFGANPSDKYGIGAAADHPGIPNTYFPPRKGGKVTLYQDAHVPDGKLPKISLEEGKVFQQGKCWEDICHAILEAHELVYIIGWSVYHPVKLVREPTRPVPSGGELSLGELLKYKSQEGVRVVMLIWDDKTSHDNFFLKTDGVMQTHDEETKKFFKHSTVHCVLAPRYASNKLSIFKQQVVGTLFTHHQKCVLVDSYACEDKRKITAFIGGLDLCDGRYDTPDHRLFVDLDTVFQNDIHNPVFPSNTGVPREPWHDLHCKVEGPAAYDLLTNFEQRWRKAKKWREFKLKRVANWHDDALLRLDRISWILTPSSGAAGDQVVQVTEEDDSESWNVQVFRSIDSGSVKGFPKDMDQAKAQHLLCGKNLKVDKSIHTAYVKAIRSAQHFIYIENQYFLGSSFHWPSYQHAGADNLVPIELALKIANKINANERFSVYIVIPMFPEGPPTSSAVQEILFWQGQTMSMMYGMIADALKRNGLSDQYHPQDYLNFYCLGKREPESSTSSMAMQTADRALASVGKYRRFMIYVHAKGMIVDDQFVILGSANINQRSLDGSRDTEIAMGAYQPHYTWARKYSHPHGQVYGYRMSLWAEHLNGLEDTFKEPDSLECVRRVNVIAKSNWDAYVSEEEKEMMGHLMLYPVQIGNDGRVSALKDWENFPDVGGKILGSPNSLPDTLTT 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0568 858 Pfam PLD-like domain 561 740 IPR025202 -
Prci3g0568 858 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 704 731 IPR001736 GO:0003824
Prci3g0568 858 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 365 400 IPR001736 GO:0003824
Prci3g0568 858 Gene3D Endonuclease Chain A 238 481 - -
Prci3g0568 858 SUPERFAMILY Phospholipase D/nuclease 208 469 - -
Prci3g0568 858 Pfam Phospholipase D Active site motif 366 400 IPR001736 GO:0003824
Prci3g0568 858 Pfam Phospholipase D C terminal 778 848 IPR024632 -
Prci3g0568 858 SMART pld_4 704 731 IPR001736 GO:0003824
Prci3g0568 858 SMART pld_4 365 400 IPR001736 GO:0003824
Prci3g0568 858 SUPERFAMILY Phospholipase D/nuclease 552 789 - -
Prci3g0568 858 Gene3D C2 domain 30 191 IPR035892 -
Prci3g0568 858 PIRSF PLD_plant 20 858 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Prci3g0568 858 SMART C2_3c 32 159 IPR000008 -
Prci3g0568 858 ProSiteProfiles C2 domain profile. 13 160 IPR000008 -
Prci3g0568 858 PANTHER PHOSPHOLIPASE D 28 847 IPR015679 -
Prci3g0568 858 Gene3D Endonuclease Chain A 497 759 - -
Prci3g0568 858 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 29 184 IPR035892 -
Prci3g0568 858 FunFam Phospholipase D delta 237 480 - -
Prci3g0568 858 Pfam C2 domain 31 162 IPR000008 -
Prci3g0568 858 CDD C2_plant_PLD 26 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0568 Prci-Chr3 7087655 7097390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0568 28 857 Phospholipase D Gene Family (Wang group) AT4G11850 53.690 0.0 907
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0568 K01115 - gmx:100779740 1329.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g0568 3 7087655 7097390 Prci3g0568 3 7087655 7097390 ECH