Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0555 ATGGAGAGGAATTTCAGTTACAATCTTCACTGGACCTCTATCATGAAGAAAAGTGAGGGGAAACATCAGAGTGATCACTCAGGGAAGCCTGATCATCATGAAGAAGATGATGTGTCTCCATCTTTCAATCTACAAAATGTTTCAAAGCTCATCCTTCCACCACTTGGTGTTTCTAGTTATAACCGGAACCCAGTACAAACTAAAGGGTGGATCATATCTCCAATGGATTCCAGATACAGGTATTGGCAGAGTTTGATGGTGCTTCTGGTGGCGTATTCGGCATGGGTTTACCCTTTTGAAGTTGCTTTCCTGCACAGCTCTCCAAATAGGGAAGTGTTCTTGGTGGACAATGTTGTTGATATTTTCTTCGCTTTAGACATTGTCCTCACATTTTTTGTAGCTTTTATTGATCCAAGAACTCAACTATTAGTAAGGGACTCAAAAAAGATTGCTATGAGGTACATGTCAACTTGGTTCGTGATGGATGTAGCATCAACTATTCCTTATGAGGCTTTAAGTTATCTAACCACAGGCAAACGCAAGGTAGGCCTTGTTTGCTACCTTCTGGGCATGCTTAGATTTTGGCGACTCAGAAGAATGAAGCAATTTTTTACCAGGCTTGAGAAAGACATTAGATTCAGCTACTTTTGGGTCAGATGTACAAGACTTCTTTTGGTTACACTATTTTCAGTTCATTGTGCTGGTTGCCTCTACTATCTACTAGCCGACCGATACCCTCACCAAGGAAAGACATGGATTGGGGCAGTGATCCCAAATTTTCGACAGACAAGCCTTTGGATTAGATACATCTCAGCCATGTACTGGTCCATCACCACCATGACCACTGTTGGTTATGGTGACCTCCACGCTGTCAACACTGCTGAAATGATATTCATTATTTTCTACATGCTCTTCAACCTTGGCCTCACTGCTTACTTGATTGGTAATATGACAAATCTTGTTGTTGAAGGAACTTGCCATACTATGGAGTTTAGAAATAGCATTGAAGCTGCATCAAGTTTTGTGGGCCGAAATCGCTTGCCTGCTAGGTTGAAGGAGCAGATTCTGGCCTATATGTGTTTGAGATTTAAGGCAGAAAGCTTAAATCAGTATCAGCTTATTGAACAATTACCAAAGTCCATTTGCACAAGCATCTGCCAGCATTTGTTTTTCCCAACGGTGGAGAAAGTCTATCTTTTCAAAGATGTCTCTAGAGAAATTCTCTTATCCTTGGTTGCGAAAATGAAGGCAGAGTATCTACCACCCAGAGAGGATGTCATCATGCAAAATGAAGCGCCAGATGACATTTACATCATAGTGTCAGGAGAAGTAGAGATCATTGATTGTGTAATGGAGAAAGAGAAAATTATAGGGACATTATTTACAGGGGAAATGTTTGGAGAAGTTGGTGCACTTCGTTGCAAACCTCAATACTTCACCTATAGAACCAAAACTCTCGCACAGCTTTTGAGGATCAAAACCAATGCTCTAATAGAAGCAATGCAAAGTAAAAAGGAAGACAATATACAAATACTCAAAAATTTCCTTCAGCATTTCAAGCAACTGAAAGATCTAAGTATTAGAGATTTGATGGCAGAGAGTGGAGAAGAGGAGGATCCAAACATGGCTCTGAACTTGTTAACTGTGGCCAGTACAGGCAATGCTGCTTTCCTTGAAGAGCTTCTCAAGGCAGGTTTAGATCCTGACGTGGGAGACTCAAAAGGGAAAACCCCATTGCACATAGCTGCATCAAATGGGCATGAAGAATGTGTAAAAGTCTTGCTTAGGCACGCATGCAACATAAATATAAGAGACTTCAAGGGCAACACTGCCTTATGGGATGCCATAGCATCAAAGCATCACTCCATATTCAGGATCCTCTACCAACTTGCTTGCCTCTCTGATCCACAAACAGGAGGTGATCTCCTGTGTACAGCAGCAAACAGAAATGACCTAACAATAATGAGTGAGCTTTTGAAACAAGGATTGAATGTGGACTCGAAAGATCGCCATGGTATGACGGCAACAGAAGTAGCCATGGCAGAGAATCATGTGGAAATGGTTCAGCTGCTTGTCATGAATGGGGCAGATGTTTCTGGCATACAAACTCATAATTTCTCTGCTTCTGCATTGAATGAAATGTTGCGAAAGTGCGAGACCGGGCATCGGATCACAATACAGGAGGCCGCACCCAATGAGAACTTAATGTGGGGAGATGAAGGTGCAGAGGAGCAAAGTTGGGGAAGATGTAGTAAATCAAGCTTCCCAAGAGTGAGTATATATAGAGGCCACCCCATAAACAGAAGAGACAAAAACTGCAAGGAAGCTGGGAGGCTCATAAGGTTTCCTGATTCACTTGAGGAGCTCAAGAGAATTGCAGGTGAGAAGTTTGGGTTTGAAGCAAAAGATGCAATGGTGACAAATGAAGAAGGAGCAGAAATAGACTCCACTGAAGTGATTAGGGACAATGATAAACTTTTCATTGTTGATAGCAAAAAATAA 2502 0.4177 MERNFSYNLHWTSIMKKSEGKHQSDHSGKPDHHEEDDVSPSFNLQNVSKLILPPLGVSSYNRNPVQTKGWIISPMDSRYRYWQSLMVLLVAYSAWVYPFEVAFLHSSPNREVFLVDNVVDIFFALDIVLTFFVAFIDPRTQLLVRDSKKIAMRYMSTWFVMDVASTIPYEALSYLTTGKRKVGLVCYLLGMLRFWRLRRMKQFFTRLEKDIRFSYFWVRCTRLLLVTLFSVHCAGCLYYLLADRYPHQGKTWIGAVIPNFRQTSLWIRYISAMYWSITTMTTVGYGDLHAVNTAEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTCHTMEFRNSIEAASSFVGRNRLPARLKEQILAYMCLRFKAESLNQYQLIEQLPKSICTSICQHLFFPTVEKVYLFKDVSREILLSLVAKMKAEYLPPREDVIMQNEAPDDIYIIVSGEVEIIDCVMEKEKIIGTLFTGEMFGEVGALRCKPQYFTYRTKTLAQLLRIKTNALIEAMQSKKEDNIQILKNFLQHFKQLKDLSIRDLMAESGEEEDPNMALNLLTVASTGNAAFLEELLKAGLDPDVGDSKGKTPLHIAASNGHEECVKVLLRHACNINIRDFKGNTALWDAIASKHHSIFRILYQLACLSDPQTGGDLLCTAANRNDLTIMSELLKQGLNVDSKDRHGMTATEVAMAENHVEMVQLLVMNGADVSGIQTHNFSASALNEMLRKCETGHRITIQEAAPNENLMWGDEGEXEEQSWGRCSKSSFPRVSIYRGHPINRRDKNCKEAGRLIRFPDSLEELKRIAGEKFGFEAKDAMVTNEEGAEIDSTEVIRDNDKLFIVDSKK 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0555 834 PANTHER POTASSIUM CHANNEL AKT1 44 830 IPR045319 GO:0005249|GO:0006813
Prci3g0555 834 SMART ANK_2a 492 524 IPR002110 GO:0005515
Prci3g0555 834 SMART ANK_2a 638 667 IPR002110 GO:0005515
Prci3g0555 834 SMART ANK_2a 607 637 IPR002110 GO:0005515
Prci3g0555 834 SMART ANK_2a 574 603 IPR002110 GO:0005515
Prci3g0555 834 SMART ANK_2a 541 570 IPR002110 GO:0005515
Prci3g0555 834 SMART ANK_2a 671 700 IPR002110 GO:0005515
Prci3g0555 834 CDD CAP_ED 399 512 IPR000595 -
Prci3g0555 834 Gene3D - 80 322 - -
Prci3g0555 834 ProSiteProfiles Ankyrin repeat profile. 574 606 IPR002110 GO:0005515
Prci3g0555 834 Gene3D - 543 717 IPR036770 -
Prci3g0555 834 FunFam Potassium channel KAT2 387 523 - -
Prci3g0555 834 Pfam Ion transport protein 80 325 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Prci3g0555 834 SUPERFAMILY cAMP-binding domain-like 328 518 IPR018490 -
Prci3g0555 834 Pfam KHA, dimerisation domain of potassium ion channel 757 829 IPR021789 -
Prci3g0555 834 ProSiteProfiles Ankyrin repeat profile. 671 703 IPR002110 GO:0005515
Prci3g0555 834 Gene3D Jelly Rolls 366 541 IPR014710 -
Prci3g0555 834 ProSiteProfiles Ankyrin repeat region circular profile. 671 699 - -
Prci3g0555 834 MobiDBLite consensus disorder prediction 20 40 - -
Prci3g0555 834 ProSiteProfiles Ankyrin repeat profile. 638 670 IPR002110 GO:0005515
Prci3g0555 834 ProSiteProfiles cAMP/cGMP binding motif profile. 399 518 IPR000595 -
Prci3g0555 834 SMART cnmp_10 399 516 IPR000595 -
Prci3g0555 834 SUPERFAMILY Ankyrin repeat 539 707 IPR036770 -
Prci3g0555 834 PRINTS Ankyrin repeat signature 575 590 IPR002110 GO:0005515
Prci3g0555 834 PRINTS Ankyrin repeat signature 687 701 IPR002110 GO:0005515
Prci3g0555 834 PRINTS EAG/ELK/ERG potassium channel family signature 269 286 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci3g0555 834 PRINTS EAG/ELK/ERG potassium channel family signature 295 306 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci3g0555 834 PRINTS EAG/ELK/ERG potassium channel family signature 313 322 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci3g0555 834 PRINTS EAG/ELK/ERG potassium channel family signature 116 126 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci3g0555 834 PRINTS EAG/ELK/ERG potassium channel family signature 127 136 IPR003938 GO:0005249|GO:0006813|GO:0016020
Prci3g0555 834 ProSiteProfiles Ankyrin repeat region circular profile. 574 605 - -
Prci3g0555 834 FunFam Potassium channel KAT3 81 323 - -
Prci3g0555 834 MobiDBLite consensus disorder prediction 20 39 - -
Prci3g0555 834 Pfam Ankyrin repeats (3 copies) 632 698 IPR002110 GO:0005515
Prci3g0555 834 Pfam Ankyrin repeats (3 copies) 550 628 IPR002110 GO:0005515
Prci3g0555 834 ProSiteProfiles KHA domain profile. 758 834 IPR021789 -
Prci3g0555 834 Pfam Cyclic nucleotide-binding domain 419 503 IPR000595 -
Prci3g0555 834 SUPERFAMILY Voltage-gated potassium channels 74 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0555 Prci-Chr3 6955949 6969363 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0555 22 579 Ion Channels AT4G22200 72.420 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0555 K21867 - gmx:100798422 1284.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g0555 3 6955949 6969363 Prci3g0555 3 6955949 6969363 ECH