Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0539 ATGCCTGATGTTCAGTCCCTTGCTAGTGATTTCTTGAATCAACTTAAGAAACGTAAAATTGAAGGCTCTCAGGCCACAGCAAAGCAGACAGCAGAAGTGCTTCGGTCTGTGATTTCTCAACAGCGGGTGCCTCACACAAATCAGGCTGGAGCTCTGATTGATGCAGTAAGAGCTGTGGGGGAGCAGCTCATTGCTGCAAATCCTGTTGAGCTAGCTGTGGGTAATATTGTAAGGCGAGTTTTGCACATTATAAGGGAGGAACATCTTTCCCTTGCAACGGATGCTATTGCTGGTTTGGGAATATCAGCAGAAAGCGATGATGAAGATGATGTGGATCGAGATGATCATCCTGTTCTATCTGCAGCTGCTGTTGCCGCTGCTGCAAGAAGCACTTTGCGTCCACCATCATTGCAAACTCTTCTAGAGGATGTGCCTAATTCAGCTGCCATTCCACACGCATCTTCTTCAGGGGGTGAATCTGAAGGAAAAAGTAGATCAGCTGACAAAGGTTCCCGAGGTCGGAAGCTGAAACACGATGTCATTGAAGCTGTCAATGATCTTATTCAAGATATTGCCACTTGCCATGAACAAATAGCGGAGCAGGCTGTAGAACACATACATCACAATGAGGTAATACTAACGCTAGGGAGTTCAAGAACAGTGCTGGAGTTTCTTTGTGCTGCAAAGGAGAAGAAGAGATCATTTCGGGTCTTTGTTGCTGAGGGTGCCCCAAGATACAAGGGGCATCTCCTTGCAAAAGATTTGGCAGCAAGAGGCTTACAAACCACAGTAATAACTGATTCTGCAGTTTTTGCCATGATATCCCGAGTAAACATGGTTATAGTTGGAGCTCATGCTGTCATGGCTAATGGAGGAGTTATTGCCCCTGTTGGGTTGAATATGGTTGCACTTGCAGCTCAAAGGCATGCTGTTCCTTTTGTTGTACTTGCTGGGAGTCACAAGTTGTGCCCTTTGTATCCTCATGATCCTGAGGTCTCGCTGAATGAGCTGAGGTCTCCTTCTGAGCTGCTTGACTTTGGGGAATTTTCAGATTGTATGGATTCGCCAAGTGGTGCGGGTTCTCTTCATGTTGTTAATCCAACATTTGATTATGTGGATCCAAAGCTTGTTAGTCTCTTCATTACTGACACAGGTGGCCACAACCCATCATACATGTACCGGCTCATAGCTGATTATTACTCTGCTGATGATTTGGTGGTGAAAGGAGGAACTATTGCTGGGAGTTGA 1248 0.4575 MPDVQSLASDFLNQLKKRKIEGSQATAKQTAEVLRSVISQQRVPHTNQAGALIDAVRAVGEQLIAANPVELAVGNIVRRVLHIIREEHLSLATDAIAGLGISAESDDEDDVDRDDHPVLSAAAVAAAARSTLRPPSLQTLLEDVPNSAAIPHASSSGGESEGKSRSADKGSRGRKLKHDVIEAVNDLIQDIATCHEQIAEQAVEHIHHNEVILTLGSSRTVLEFLCAAKEKKRSFRVFVAEGAPRYKGHLLAKDLAARGLQTTVITDSAVFAMISRVNMVIVGAHAVMANGGVIAPVGLNMVALAAQRHAVPFVVLAGSHKLCPLYPHDPEVSLNELRSPSELLDFGEFSDCMDSPSGAGSLHVVNPTFDYVDPKLVSLFITDTGGHNPSYMYRLIADYYSADDLVVKGGTIAGS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0539 415 Pfam Initiation factor 2 subunit family 19 389 IPR000649 GO:0044237
Prci3g0539 415 MobiDBLite consensus disorder prediction 148 175 - -
Prci3g0539 415 FunFam translation initiation factor eIF-2B subunit beta 194 400 - -
Prci3g0539 415 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 2 406 - -
Prci3g0539 415 Gene3D - 194 399 IPR042529 -
Prci3g0539 415 SUPERFAMILY NagB/RpiA/CoA transferase-like 8 404 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0539 Prci-Chr3 6785477 6792289 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0539 1 407 Eukaryotic Initiation Factors Gene Family AT3G07300 81.174 0.0 631
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0539 K03754 - gmx:100778545 695.656