Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0496 ATGGGTAGATCAGAGGAGGAAGAAGAAGACAAAAAGATGCAGAAAATGGATCTCTCTTTGAAGATTATTGACGATGAAGAAGCAGTTCAGAAGGCAGAAGAAGAAGATGATGATGATGATGAAGAAATGGCACGAGCAGTGAAGGTTGACGAAGAAGAAGCTCCTCATCATGAAGCCACCATGGTTGCAGCAGGAGATCAGACACGAGAACAACAAGAAGATGATAATGGGTCAATGGCGGAGAACACTAAAACAAGAGAGGAGCTAAGTGTTTTACAAGTGGAGACAGATCGCATGAAAGAAGAAAACAAAGTGTTACGGAAAGAGGTGGAGCAAACCATGAAAGACTACTACGATCTTCAGATGAAATTCGCAGTCATCCAGCAGAACCACCTCGAAAAGCAAAAAGACCCCCAGATGATGTCTCTCTCATCACTTGAAAACAATGGAAATTCTGGCGGTGGTGAGGATGATGGTATGAGGGAGATTGGATTGGGATTATCACTGAGGTTACAGACTAGTAAGAGTGAACCAGAAGAAAATATTTATAAAGAAGAGTCTAAGAATAACAAGGAATTATTAGAATTGACGAGTTTTGGAACCTCATCAGCAGTACGACAGAACAAGATAGCTCGCACTAGTTACCATGATCAGTCACCTGGTATCAGTAATACCCATGTTGCTTCATCAACTCCAACTAGTAGGAAGGCTAGGGTTTCTGTTAGAGCCAGATGTGAAGCGGCCACTATGAATGATGGGTGTCAATGGAGAAAATATGGTCAAAAAATTTCCAAAGGGAATCCATGTCCTCGTGCCTATTATCGCTGCACTGTAGCCCCCGGCTGTCCAGTCAGAAAACAGGTGCAGAGATGCTTAGAGGACATGTCCATATTAATCACAACATATGAAGGAACACACAATCATCCTCTCCCAGTAGGTGCAACAGCCATGGCTTCCACTGCTTATAATGCAGCTAACCAATATTACAACATCCAATCAAACCCTAATAATAATAACATTGACCCTTCCAAAGGACTCGTTCTCGATCTCACCTCAACCTCATCATCATCATCTTCACCACCCAGATTTTCTTGGACACCAAACAGTAGTAATTTTCCCACTCAAGAAATATCAGCAAGGCACTTCCATTATTACCATTTGGATATCATCATCATCATCATCATCAAAGTGTGTCTGCGATAG 1203 0.4206 MGRSEEEEEDKKMQKMDLSLKIIDDEEAVQKAEEEDDDDDEEMARAVKVDEEEAPHHEATMVAAGDQTREQQEDDNGSMAENTKTREELSVLQVETDRMKEENKVLRKEVEQTMKDYYDLQMKFAVIQQNHLEKQKDPQMMSLSSLENNGNSGGGEDDGMREIGLGLSLRLQTSKSEPEENIYKEESKNNKELLELTSFGTSSAVRQNKIARTSYHDQSPGISNTHVASSTPTSRKARVSVRARCEAATMNDGCQWRKYGQKISKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPLPVGATAMASTAYNAANQYYNIQSNPNNNNIDPSKGLVLDLTSTSSSSSSPPRFSWTPNSSNFPTQEISARHFHYYHLDIIIIIIIKVCLR 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0496 400 FunFam probable WRKY transcription factor 31 235 312 - -
Prci3g0496 400 Gene3D WRKY domain 234 312 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci3g0496 400 ProSiteProfiles WRKY domain profile. 245 311 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g0496 400 SMART WRKY_cls 250 310 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g0496 400 SUPERFAMILY WRKY DNA-binding domain 243 311 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci3g0496 400 MobiDBLite consensus disorder prediction 68 88 - -
Prci3g0496 400 MobiDBLite consensus disorder prediction 1 88 - -
Prci3g0496 400 Coils Coil 82 116 - -
Prci3g0496 400 Coils Coil 15 35 - -
Prci3g0496 400 MobiDBLite consensus disorder prediction 213 235 - -
Prci3g0496 400 Pfam WRKY DNA -binding domain 251 309 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g0496 400 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 51 363 IPR044810 GO:0003700
Prci3g0496 400 MobiDBLite consensus disorder prediction 1 28 - -
Prci3g0496 400 MobiDBLite consensus disorder prediction 29 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0496 Prci-Chr3 6461833 6466916 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0496 63 321 WRKY Transcription Factor Family AT1G68150 49.446 1.68e-73 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci3g0496 WRKY 3.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0496 - - pcin:129306987 691.034