Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci3g0495 | ATGGGTAGATCAGAGGAGGAAGAAGAAGACAAAAAGATGCAGAAAATGGATCTCTCTTTGAAGATTATTGACGATGAAGAAGCAGTTCAGAAGGCAGAAGAAGAAGATGATGATGATGATGAAGAAATGGCACGAGCAGTGAAGGTTGACGAAGAAGAAGCTCCTCATCATGAAGCCACCATGGTTGCAGCAGGAGATCAGACACGAGAACAACAAGAAGATGATAATGGGTCAATGGCGGAGAACACTAAAACAAGAGAGGACCCCCAGATGATGTCTCTCTCATCACTTGAAAACAATGGAAATTCTGGCGGTGGTGAGGATGATGGTATGAGGGAGATTGGATTGGGATTATCACTGAGGTTACAGACTAGTAAGAGTGAACCAGAAGAAAATATTTATAAAGAAGAGTCTAAGAATAACAAGGAATTATTAGAATTGACGAGTTTTGGAACCTCATCAGCAGTACGACAGAACAAGATAGCTCGCACTAGTTACCATGATCAGTCACCTGGTATCAGTAATACCCATGTTGCTTCATCAACTCCAACTAGTAGGAAGGCTAGGGTTTCTGTTAGAGCCAGATGTGAAGCGGCCACTATGAATGATGGGTGTCAATGGAGAAAATATGGTCAAAAAATTTCCAAAGGGAATCCATGTCCTCGTGCCTATTATCGCTGCACTGTAGCCCCCGGCTGTCCAGTCAGAAAACAGGTGCAGAGATGCTTAGAGGACATGTCCATATTAATCACAACATATGAAGGAACACACAATCATCCTCTCCCAGTAGGTGCAACAGCCATGGCTTCCACTGCTTATAATGCAGCTAACCAATATTACAACATCCAATCAAACCCTAATAATAATAACATTGACCCTTCCAAAGGACTCGTTCTCGATCTCACCTCAACCTCATCATCATCATCTTCACCACCCAGATTTTCTTGGACACCAAACAGTAGTAATTTTCCCACTCAAGAAATATCAGCAAGGCACTTCCATTATTACCATTTGGATATCATCATCATCATCATCATCAAAGTGTGTCTGCGATAG | 1056 | 0.4214 | MGRSEEEEEDKKMQKMDLSLKIIDDEEAVQKAEEEDDDDDEEMARAVKVDEEEAPHHEATMVAAGDQTREQQEDDNGSMAENTKTREDPQMMSLSSLENNGNSGGGEDDGMREIGLGLSLRLQTSKSEPEENIYKEESKNNKELLELTSFGTSSAVRQNKIARTSYHDQSPGISNTHVASSTPTSRKARVSVRARCEAATMNDGCQWRKYGQKISKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPLPVGATAMASTAYNAANQYYNIQSNPNNNNIDPSKGLVLDLTSTSSSSSSPPRFSWTPNSSNFPTQEISARHFHYYHLDIIIIIIIKVCLR | 351 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci3g0495 | 351 | Pfam | WRKY DNA -binding domain | 202 | 260 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Prci3g0495 | 351 | MobiDBLite | consensus disorder prediction | 83 | 103 | - | - | |
Prci3g0495 | 351 | ProSiteProfiles | WRKY domain profile. | 196 | 262 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Prci3g0495 | 351 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 20 | 314 | IPR044810 | GO:0003700 | |
Prci3g0495 | 351 | Gene3D | WRKY domain | 185 | 263 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Prci3g0495 | 351 | FunFam | probable WRKY transcription factor 31 | 186 | 263 | - | - | |
Prci3g0495 | 351 | MobiDBLite | consensus disorder prediction | 166 | 186 | - | - | |
Prci3g0495 | 351 | SUPERFAMILY | WRKY DNA-binding domain | 194 | 262 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Prci3g0495 | 351 | Coils | Coil | 15 | 35 | - | - | |
Prci3g0495 | 351 | MobiDBLite | consensus disorder prediction | 1 | 112 | - | - | |
Prci3g0495 | 351 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Prci3g0495 | 351 | SMART | WRKY_cls | 201 | 261 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Prci3g0495 | 351 | MobiDBLite | consensus disorder prediction | 29 | 46 | - | - | |
Prci3g0495 | 351 | MobiDBLite | consensus disorder prediction | 68 | 82 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci3g0495 | Prci-Chr3 | 6461833 | 6466922 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci3g0495 | 112 | 272 | WRKY Transcription Factor Family | AT1G68150 | 60.870 | 5.41e-62 | 201 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Prci3g0495 | WRKY | 2.5e-24 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci3g0495 | - | - | pcin:129306987 | 573.548 |