Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0495 ATGGGTAGATCAGAGGAGGAAGAAGAAGACAAAAAGATGCAGAAAATGGATCTCTCTTTGAAGATTATTGACGATGAAGAAGCAGTTCAGAAGGCAGAAGAAGAAGATGATGATGATGATGAAGAAATGGCACGAGCAGTGAAGGTTGACGAAGAAGAAGCTCCTCATCATGAAGCCACCATGGTTGCAGCAGGAGATCAGACACGAGAACAACAAGAAGATGATAATGGGTCAATGGCGGAGAACACTAAAACAAGAGAGGACCCCCAGATGATGTCTCTCTCATCACTTGAAAACAATGGAAATTCTGGCGGTGGTGAGGATGATGGTATGAGGGAGATTGGATTGGGATTATCACTGAGGTTACAGACTAGTAAGAGTGAACCAGAAGAAAATATTTATAAAGAAGAGTCTAAGAATAACAAGGAATTATTAGAATTGACGAGTTTTGGAACCTCATCAGCAGTACGACAGAACAAGATAGCTCGCACTAGTTACCATGATCAGTCACCTGGTATCAGTAATACCCATGTTGCTTCATCAACTCCAACTAGTAGGAAGGCTAGGGTTTCTGTTAGAGCCAGATGTGAAGCGGCCACTATGAATGATGGGTGTCAATGGAGAAAATATGGTCAAAAAATTTCCAAAGGGAATCCATGTCCTCGTGCCTATTATCGCTGCACTGTAGCCCCCGGCTGTCCAGTCAGAAAACAGGTGCAGAGATGCTTAGAGGACATGTCCATATTAATCACAACATATGAAGGAACACACAATCATCCTCTCCCAGTAGGTGCAACAGCCATGGCTTCCACTGCTTATAATGCAGCTAACCAATATTACAACATCCAATCAAACCCTAATAATAATAACATTGACCCTTCCAAAGGACTCGTTCTCGATCTCACCTCAACCTCATCATCATCATCTTCACCACCCAGATTTTCTTGGACACCAAACAGTAGTAATTTTCCCACTCAAGAAATATCAGCAAGGCACTTCCATTATTACCATTTGGATATCATCATCATCATCATCATCAAAGTGTGTCTGCGATAG 1056 0.4214 MGRSEEEEEDKKMQKMDLSLKIIDDEEAVQKAEEEDDDDDEEMARAVKVDEEEAPHHEATMVAAGDQTREQQEDDNGSMAENTKTREDPQMMSLSSLENNGNSGGGEDDGMREIGLGLSLRLQTSKSEPEENIYKEESKNNKELLELTSFGTSSAVRQNKIARTSYHDQSPGISNTHVASSTPTSRKARVSVRARCEAATMNDGCQWRKYGQKISKGNPCPRAYYRCTVAPGCPVRKQVQRCLEDMSILITTYEGTHNHPLPVGATAMASTAYNAANQYYNIQSNPNNNNIDPSKGLVLDLTSTSSSSSSPPRFSWTPNSSNFPTQEISARHFHYYHLDIIIIIIIKVCLR 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0495 351 Pfam WRKY DNA -binding domain 202 260 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g0495 351 MobiDBLite consensus disorder prediction 83 103 - -
Prci3g0495 351 ProSiteProfiles WRKY domain profile. 196 262 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g0495 351 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 20 314 IPR044810 GO:0003700
Prci3g0495 351 Gene3D WRKY domain 185 263 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci3g0495 351 FunFam probable WRKY transcription factor 31 186 263 - -
Prci3g0495 351 MobiDBLite consensus disorder prediction 166 186 - -
Prci3g0495 351 SUPERFAMILY WRKY DNA-binding domain 194 262 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci3g0495 351 Coils Coil 15 35 - -
Prci3g0495 351 MobiDBLite consensus disorder prediction 1 112 - -
Prci3g0495 351 MobiDBLite consensus disorder prediction 1 28 - -
Prci3g0495 351 SMART WRKY_cls 201 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci3g0495 351 MobiDBLite consensus disorder prediction 29 46 - -
Prci3g0495 351 MobiDBLite consensus disorder prediction 68 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0495 Prci-Chr3 6461833 6466922 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0495 112 272 WRKY Transcription Factor Family AT1G68150 60.870 5.41e-62 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci3g0495 WRKY 2.5e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0495 - - pcin:129306987 573.548