Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0485 ATGGAGAGTTTAAGGAATATGTTGAAAGGGTTAAAACCAGCGGTGTTAATGGTGATGGTGCAAGTTGCATATGCAGGAGTGAATGTGTTGTTCAAACTCGCCATTAACGATGGCATGAGCATGAGGATCGCCACCGCGTATCGCCTTCTCTTCGCATCGGCCTTCACTCTTCCTCTTGCTTTGCTCTTTGAAAGGAATAAGAGACCAAAGCTCACTCGGAGGCTAATGTTCATGGAATTTCTTTGTGGCTTGTTTGGGGGAAGTTTATTACAAAACCTTTACTTCGAGGCTATGGCTTTGACATCGGCAACATTAGTTTCTGCTATCTATAACCTTATTCCACCTATCACTTTCGTCATGGCTATCATATGGGGCTTAGAGAGATTGAACTTGGGAACAGCAGGAGGGAAAGCAAAGATACTAGGAACTATAATAGGCCTCAGTGGGGCAGCACTTCTCACATTCTTCAAAGGTTTTGAAGTTCATATCTGGCCCTCCCAAATTAACCTTTTACACCATGACCAAAACGAAATCGTATCACCTGCTGATCACTCAGAGAAACAAAGATTGTTAGGTGTTCTATGTTCCATCTTGAGCTGCTTCTCCTTTGCTTTTTGGCTTATTGTTCAGGCACACATGGGTGAAGATTGCCCGAGCTATCTGTCTAGCGCAGCTTTGATGTCTATAATGGGAGCAATACAAGCCACTTTGTTTGCTCTCTGTGTTGATAGAGATTGGGACAAATGGAAATTAGGTTGGAATGTTAGGCTTCTCACCGTCTCCTATGCGATGAGGGGTCCCTTGTTTACATCAGTGTTCCAACCTCTAATGCTTGTAGTAGTGGCCATTGCTGCTTCTTTGACCTTGAATGAGAAACTCTATTTAGGAAGTGTGCTTGGATCATTTCTGATAGTGTGTGGGTTGTACATTGTGGTATGGGGTAAGAGCCAAGAAATGAAAATGAAGACTGAGTTGGTCCAGTCAAAAGAAGACAGCAAACAAGAAGATCAACCTGAGCCAATACTAGAAGTTGTTGTGTTCAATAAAGTTCATGCTGGTTCATCATGA 1068 0.4288 MESLRNMLKGLKPAVLMVMVQVAYAGVNVLFKLAINDGMSMRIATAYRLLFASAFTLPLALLFERNKRPKLTRRLMFMEFLCGLFGGSLLQNLYFEAMALTSATLVSAIYNLIPPITFVMAIIWGLERLNLGTAGGKAKILGTIIGLSGAALLTFFKGFEVHIWPSQINLLHHDQNEIVSPADHSEKQRLLGVLCSILSCFSFAFWLIVQAHMGEDCPSYLSSAALMSIMGAIQATLFALCVDRDWDKWKLGWNVRLLTVSYAMRGPLFTSVFQPLMLVVVAIAASLTLNEKLYLGSVLGSFLIVCGLYIVVWGKSQEMKMKTELVQSKEDSKQEDQPEPILEVVVFNKVHAGSS 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0485 355 Pfam EamA-like transporter family 13 154 IPR000620 GO:0016020
Prci3g0485 355 PANTHER WAT1-RELATED PROTEIN 12 327 IPR030184 GO:0016020|GO:0022857
Prci3g0485 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 256 316 - -
Prci3g0485 355 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0485 Prci-Chr3 6326108 6330843 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0485 11 336 Nodulin-like Gene Family AT1G25270 37.572 2.83e-83 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0485 - - gmx:100798755 422.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g0485 3 6326108 6330843 Prci3g0487 3 6326109 6330843 CCT
Prci3g0485 3 6326108 6330843 Prci3g0484 3 6276412 6283849 CCT
Prci3g0485 3 6326108 6330843 Prci3g0485 3 6326108 6330843 ECH