Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0484 ATGGAGGATTTACGTAAGATGATGAATGGGTTAAAACCAGTGGTTTTAATGGTGATGGTGCAGATAGCATTTGCATCAGTGAATGTGTTGTACAAGCTCGCCGCTAATGATGGAATGAGCATGAGGATCGCTACTGCCTATCGCCTTCTCTTCGCATCTGTTTCTACTCTTCCTCTCGCTCTTGTCTTTGAAAGGAACAAGAGACCGAAGATCACTCAGAGAGTTCTTTTCATGGCATTTCTTTGTGGCTTATTTGGGGGGAGTTTATTTCAAAACATTTACTTCGAGGCTCTAGCTTTGACATCCGCAACGTTTGTTTCTGCTATTTACAACCTTATTCCAGTCATCACTTTCATATTGGCTATCTCTTGCGGCTTTGAAAGATTAAACTTGGGAGCAGCAGGAGGGAAAGCAAAGGTGTTGGGAACCATAATAGGGATTGGTGGGGCAATGCTTCTTACGTTCTTCAAAGGCTTTGAAATTCAAATTTGGTCCTTCCACGTTAATCCTTTGCACCCACATCATGACCAAAACGACACCGTTTTGACCACACGACATGGTCGCTCAGAATTGCTTGGTGTTCTCTGTGCCATAGCAAGCTGCTTCTCCAATGCTTGCTGGCTAATTATTCAGGCTAAGATGAGTGCAGAATATCCATGCCATCTCTCTACCACATTTTTAATTTATACAATGGGAGCAATACAAGCCATAGTGTTTGCTCTTTGTATGGAAAGAGATTGGAACCAATGGAAGTTGGGTTGGAATGTCAGGCTTCTTGCAGTTTTGATCGCGGGAATTATTGCATCGGGAATGTTGGTTGTGATGGCATGGTGTGTGAGGATGAGAGGTCCAGTGTTTGCTTCTGCATTCACTCCTTTAATGCTTGTGATAGTGGCCCTTGCTGCTTCTTTAACGCTGAATGAGAAACTCTATTTAGGAAGTGTGATTGGAGCTCTGCTGATAGTGTGTGGCTTATACTTTGTGCTGTGGGGGAAGAGGAGGGACGTGAGGACGATGCCTCAGTCGTTGCCATCAGAAACGACCCAGCAAGAAATTGCATGA 1062 0.4407 MEDLRKMMNGLKPVVLMVMVQIAFASVNVLYKLAANDGMSMRIATAYRLLFASVSTLPLALVFERNKRPKITQRVLFMAFLCGLFGGSLFQNIYFEALALTSATFVSAIYNLIPVITFILAISCGFERLNLGAAGGKAKVLGTIIGIGGAMLLTFFKGFEIQIWSFHVNPLHPHHDQNDTVLTTRHGRSELLGVLCAIASCFSNACWLIIQAKMSAEYPCHLSTTFLIYTMGAIQAIVFALCMERDWNQWKLGWNVRLLAVLIAGIIASGMLVVMAWCVRMRGPVFASAFTPLMLVIVALAASLTLNEKLYLGSVIGALLIVCGLYFVLWGKRRDVRTMPQSLPSETTQQEIA 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0484 353 Pfam EamA-like transporter family 192 329 IPR000620 GO:0016020
Prci3g0484 353 Pfam EamA-like transporter family 12 154 IPR000620 GO:0016020
Prci3g0484 353 PANTHER WAT1-RELATED PROTEIN 12 336 IPR030184 GO:0016020|GO:0022857
Prci3g0484 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
Prci3g0484 353 SUPERFAMILY Multidrug resistance efflux transporter EmrE 237 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0484 Prci-Chr3 6276412 6283849 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0484 11 352 Nodulin-like Gene Family AT1G25270 41.618 2.20e-92 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0484 - - gmx:100809587 479.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g0485 3 6326108 6330843 Prci3g0484 3 6276412 6283849 CCT
Prci3g0484 3 6276412 6283849 Prci3g0484 3 6276412 6283849 ECH