Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0480 ATGACGGCGTCGATGAAGATAGCAGATGTCTGTAATGCGGTGCATGGGTTGAAGCCGGCCATGTTAATGGTGGTAGTTCAGATAGCGTTCGCCGGAGTCAATGTACTGTACAAGCTCGCCGTCAACGACGGCATGAACCTTCGAGTCGTCGTTGCCTATCGCTTTATCTTCGCCACCGTTTTCATTGCTCCTCTCGCTCTCATTCTCGAAAGGAAGAAGAGACCAAAGATGACCTGGAAGATACTGTTTCAAGCATTTCTTTGTGGTTTGTTTGGAGGATCAGTGGCACAAAACTTATACTTGGAAGCATTGGCTTTAACATCAGCAACATTTGTTTCAGCGATGGCCAATCTTATTCCAGCCATCACCTTTATAATGGCTGTCTCCTTCCGCTTGGAGAGTTTAAATTTAAGAACAGCATCAGGAAAAGCCAAGATCATTGGAACAATAACAGGAATAAGTGGGGCTATGATTCTGACATTTTTCAAAGGCTTAGAAATACACACAGGCTCCTTCCATATCACCCTCATGCATCATCGTAATGGACACATGGCATCACCACAGTCTTCCTTTGGCGGCAACACCCTCTTAGGTGCTCTCTGTGCTATGGGAAGCAACTTTAGTTACTCTTTGTGGCTCATCATCCAGACAAAGATGAGCAAGAATTACCCATGTCATTACTCAAGCACAGCTTTGATGAGTGTGACGGGGGCAATCATATCTATTGCTTTTGCTCTCTGTCTTGAGAGGGATATGATTCAATGGAAGCTGGGTTTGAATGTTAGGCTTCTTACTGCAGCCTATTCGGGAATAATTGTGTCTGGAGTAATGGTGGTGGTGATGGCATGGTGTATGCATATGAGAGGCCCTCTTTATGTTTCTGCTTTCAACCCCCTTTTGCTTGTCTTTGTGGCCATTGCTGGTTGTTTCATGTTGGATGAGAAGCTACATCTTGGAAGCGTAATTGGAGGGATGTTGATAATATGTGGATTATATGTGGTTCTATGGGGAAAACGCAAAGAAATGAAGAAGATGAATCAACTTGTTCCATCCCAGAGCCTCCATGAAATTATAGTGAGATCTCCCACAGAAGATAAACATATCCCTCACAACAACAATAATAATGATATTGAACTTGTTAGAGATAGTGACCATTCATCAGAAAATGCAAATGAAAATGCAAATGAAGAAATGAAGGATAATCAGAACAAAAGGCAGAGATCAGAGGATGAAGAAAAAAAGGAAGAAGCAATATCAAGAAATAGCTAA 1269 0.424 MTASMKIADVCNAVHGLKPAMLMVVVQIAFAGVNVLYKLAVNDGMNLRVVVAYRFIFATVFIAPLALILERKKRPKMTWKILFQAFLCGLFGGSVAQNLYLEALALTSATFVSAMANLIPAITFIMAVSFRLESLNLRTASGKAKIIGTITGISGAMILTFFKGLEIHTGSFHITLMHHRNGHMASPQSSFGGNTLLGALCAMGSNFSYSLWLIIQTKMSKNYPCHYSSTALMSVTGAIISIAFALCLERDMIQWKLGLNVRLLTAAYSGIIVSGVMVVVMAWCMHMRGPLYVSAFNPLLLVFVAIAGCFMLDEKLHLGSVIGGMLIICGLYVVLWGKRKEMKKMNQLVPSQSLHEIIVRSPTEDKHIPHNNNNNDIELVRDSDHSSENANENANEEMKDNQNKRQRSEDEEKKEEAISRNS 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0480 422 MobiDBLite consensus disorder prediction 362 422 - -
Prci3g0480 422 Coils Coil 387 414 - -
Prci3g0480 422 PANTHER WAT1-RELATED PROTEIN 18 347 IPR030184 GO:0016020|GO:0022857
Prci3g0480 422 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 159 - -
Prci3g0480 422 Pfam EamA-like transporter family 197 335 IPR000620 GO:0016020
Prci3g0480 422 Pfam EamA-like transporter family 18 150 IPR000620 GO:0016020
Prci3g0480 422 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0480 Prci-Chr3 6048746 6055538 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0480 17 379 Nodulin-like Gene Family AT1G25270 42.700 8.10e-105 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0480 - - gmx:100787839 504.597