Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0479 ATGGTAGATGTCTCTAATGCGTTGCACAGGTTGAAGCCGGCCATGTTAATGGTAGTGGTTCAGATAGCATACGCCGGGGTCAATGTACTGTACAAGCTCGCCGTCAACGACGGCATGAACCTAAGAGTCGTCGTTGCCTACCGCTTTATCTTCGCCACTGTTTTCATTGCTCCTCTTGCTCTCGTTCTGGAATGGAAGAAGAGACCAAAGATGACTTGGAAGATATTGTTTCAAGCATTTCTTTGTGGTTTATTCGGAGGATCATTGGCACAAAACTTATATTTGGAAGCATTGGCTTTAACGTCGGCGACCTTTGTTTCAGCGATGGCCAACCTTATTCCAGCTATCACCTTTATAATGGCGGTCTCTTTTCACTTGGAAAGTTTGAGTTTAAGAACATCATCAGGAAAAGCCAAGATTGTTGGAACAGTAACAGGAGTAAGTGGGGCTATGATTATGACATTTTTCAAAGGTTCAGAAATACACACAGGCTCCTTCCACATCACCCTCATGCATCATCATAATGGACACATGGCATCACCACAGTCTTCCTCTAGGGGTAACACCCTCTTAGGTGCTCTTTGCGTTCTAGGAAGCAACTTTAGTTATGCTTTGTGGCTCATCATTCAGACAAAGATGAGTAAGAATTACCCATGTCATTACTCAAGTACAGCTTTGATGAGTATCATGGGATCACTCTTATCTGTTGCTTTTGCTCTTTATCTTGAGAGGGATTGGACACAATGGAAGCTGGGTTGGAATGTCAGGCTTCTCACTATAACTTATACAGGAATAGTTATGTCTGGAGTAATGGTGGTAGTAATGGCATGGTGTATGCATATGAGAGGCCCTCTTTACGTCTCTGCTTTTAGTCCTCTCATGCTTGTTTTTGTAGCCATTGCTAGTTGTTTCATGTTGGATGAGAAGCTATATCTTGGAAGTGTAATTGGAGGGGTATTGATAATCTGTGGATTATATGGAATTTTATGGGGGAAAATCAAAGAGATGAAGAAGATGAATCAACTTGTTCCGTCTCAAAGCCTCCACGAAATTATTGTGAGATCTCCCACAGAAGATAAATGTATCCCTCATAACAACAATAATAGTAACGTTGAAGGTGTTAGAGATAATGACTGTTCCTCAGAAAATGCTAATGAAGCTTCAAAGGATAATCAGAACGAAAGGCAAAGATCAATGGAGGAGGAAAAAGAAGCAACTATATCAATAGCTAGCTAG 1236 0.4134 MVDVSNALHRLKPAMLMVVVQIAYAGVNVLYKLAVNDGMNLRVVVAYRFIFATVFIAPLALVLEWKKRPKMTWKILFQAFLCGLFGGSLAQNLYLEALALTSATFVSAMANLIPAITFIMAVSFHLESLSLRTSSGKAKIVGTVTGVSGAMIMTFFKGSEIHTGSFHITLMHHHNGHMASPQSSSRGNTLLGALCVLGSNFSYALWLIIQTKMSKNYPCHYSSTALMSIMGSLLSVAFALYLERDWTQWKLGWNVRLLTITYTGIVMSGVMVVVMAWCMHMRGPLYVSAFSPLMLVFVAIASCFMLDEKLYLGSVIGGVLIICGLYGILWGKIKEMKKMNQLVPSQSLHEIIVRSPTEDKCIPHNNNNSNVEGVRDNDCSSENANEASKDNQNERQRSMEEEKEATISIAS 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0479 411 MobiDBLite consensus disorder prediction 362 411 - -
Prci3g0479 411 SUPERFAMILY Multidrug resistance efflux transporter EmrE 230 333 - -
Prci3g0479 411 MobiDBLite consensus disorder prediction 362 387 - -
Prci3g0479 411 PANTHER WAT1-RELATED PROTEIN 12 341 IPR030184 GO:0016020|GO:0022857
Prci3g0479 411 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 154 - -
Prci3g0479 411 Pfam EamA-like transporter family 12 153 IPR000620 GO:0016020
Prci3g0479 411 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020
Prci3g0479 411 MobiDBLite consensus disorder prediction 388 404 - -
Prci3g0479 411 Coils Coil 384 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0479 Prci-Chr3 6032832 6037760 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0479 11 337 Nodulin-like Gene Family AT1G25270 45.122 5.86e-99 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0479 - - gmx:100787839 498.819