Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0478 ATGGTGGATGTGTGGAATGTGGTGGTTGGGTTGAAGCCCGCGATGTTGATGGTGGTGCTTCAGATAACATTCGCCGGCGTCAATGTGCTGTACAAGATCGCGGTCAGCGATGGCATGAACCTGAGAGTCGTCATTGCTTATCGATTTATCTTCGCCACTGCTTTCATTGCACCTCTTGCTCTCGTTCTGGAAAGGAACAAGAGACCAAAGATGACTTGGAGCATACTGTTTCAGGCATCTCTATGCGGGTTAATTGGAGGAGCAGTGTCACAAAACCTATACTTGGAGTCATTGGCTTTAACATCAGCAACGTTTGCTTCGGCCATGGCCAATCTTACTCCAGCTATCACGTTCTTGATGGCCGTCTTCTTCCGTTTGGAAAGATTTAATTTAGGTACAACAGCAGGAAAAGCCAAGATTATTGGAACATTAATAGCAATAAGTGGGGCTATGATTCTGACATTTTTCAAAGGTATAAATATAAATTCAGGCTCCATCCACATCACCTTGTTGCATCATCATAACATACATGTGGCATCACCACAATCCTACTCCAATGGTAATAAGGCTCTCTTGGTGGGCACACTTTGTTCTCTAGGAAGCAGCTTCAGTTATGCTCTATGGCTCATCATTCAGACAAAGATAAGCAAGAGTTACCCATGTCATTATTCAAGCATAGCTTTGATGAGTGTCATAGGGTCAATCACATCTATTGCTTTTGCTCTTTGTCTTGAGAGAGATTGGACTCAATGGAAATTGGGTTGGAATGTCAGACTTCTCACTACTGCCTACTCGGGAATAGTTGTGTCTGGAATAATGGTAGTGGTGATGGCATGGTGTGTAGACATAAAAGGCCCACTTTATGTATCTGCTTTCAATCCTCTTATGCTTGTCTTTGTGGCCTTAGTCGGTTTTTCCATGTTGGACGAGAAGCTATATCTTGGAAGCATAATTGGTGGGTTGTTGATAGTGTGTGGTGTGTATGCGGTTCTATGGGGAAAAGACAAGGAGATAAATCCAATTGTTCCTTCACGAAGCCTTCACGAAATCACAGTGAGATCTGCTGCAGAAGAAAAACGTAACCCTCATAATAACCATCGTGAGGTTGAGTTTGTTAGGGATTACCATCATTCTTCAAAAAATACAAGTGAAGTAGTGCGAGATATATAG 1170 0.4274 MVDVWNVVVGLKPAMLMVVLQITFAGVNVLYKIAVSDGMNLRVVIAYRFIFATAFIAPLALVLERNKRPKMTWSILFQASLCGLIGGAVSQNLYLESLALTSATFASAMANLTPAITFLMAVFFRLERFNLGTTAGKAKIIGTLIAISGAMILTFFKGININSGSIHITLLHHHNIHVASPQSYSNGNKALLVGTLCSLGSSFSYALWLIIQTKISKSYPCHYSSIALMSVIGSITSIAFALCLERDWTQWKLGWNVRLLTTAYSGIVVSGIMVVVMAWCVDIKGPLYVSAFNPLMLVFVALVGFSMLDEKLYLGSIIGGLLIVCGVYAVLWGKDKEINPIVPSRSLHEITVRSAAEEKRNPHNNHREVEFVRDYHHSSKNTSEVVRDI 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0478 389 Pfam EamA-like transporter family 13 154 IPR000620 GO:0016020
Prci3g0478 389 Pfam EamA-like transporter family 194 331 IPR000620 GO:0016020
Prci3g0478 389 PANTHER WAT1-RELATED PROTEIN 13 344 IPR030184 GO:0016020|GO:0022857
Prci3g0478 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 236 335 - -
Prci3g0478 389 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0478 Prci-Chr3 6010841 6016553 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0478 11 389 Nodulin-like Gene Family AT1G25270 41.425 2.25e-100 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0478 - - gmx:100787839 444.891