Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0476 ATGGTAGATGTACAGGACGACATGGTCCATCGGTTGAAGCCGGCGGTGTTAATGGTGGCGTCTCAGATAGCTTTTGCCGGCCTTCTTGTGCTGTACAAGCTCGCCGTCAATGATGGCATGAACTTGAGAGTCATTATTGCTTACCGCTTTATCTTCGCTACCCTTTTCATTGCTCCTCTTGCCTTCATTCTCGAAAGGAACAAGAGACCAAAGATGACTTGGACCATACTCTTTCACGCATTTCTATGTGGGTTATTTGGAGGAGTATTGTCACAAAACTTGCACTTGGAAGCACTGGCTTTAGAGTCGGCAACATTTGCGTCGGCCGTGAGCAATCTTGTTCCTGCCATAACCTTTATCATGGCCGTCTCTTTCAGATTGGAAAGACTGAATTTGAGAACAGCAGCAGGAAAGGCCAAGATCATTGGGACAATAATAGGAATAAGTGGGGCTATGATTCTGACATTGTTCAAAGGGAAAGAAATAAACACTGGCTTCTTTCATATCACCCTCTTGCATCACCATAAACGACACGTGTCATCATCACACTCTTCTAGTGGCAAATCCCTCTTAGGTGCTCTTTGTGGCCTGGGAAGCTGCTTTACTTATGCTTTGTGGATCATCATTCAGACAAAGATGAGTGAGAGTTACCCATGTCATTACTCAAGCACAGCTTTGATGAGTTTGATGGGGTCACTCTTATCTATTGCCTCTGCTCTTTGCCTTGAGAGGGATTGGACTCAATGGAAGTTGGGTTGGAATATCAGGCTCCTCACAGCAGCTTATGCGGGAGTCGTGGTTTCTGGAATAATGGTGGCGGTAACTACATGGTGTGTGCATATGAGAGGCCCTCTCTATGTCTCTACCTTTGGCCCTCTTTTGCTTGTTTTGATGGCCTTCCCTGGCTCTTTCATGTTAGACGAGAAGCTACATCTTGGAAGCATAATAGGAGGGGTGATGGTAATATGTGGACTATATGTGGTTCTATGGGGAAAAGACAAAGAGATGAAGAAGATGAATCATCAACTTATTGTTTCATCAGAAAGCCTTCATGATGAACTCAAAGTCACCAGATCTCCTGCAGAAGACAAAATCTGCCCTTATAATGATGTTGAAGTTTTTAGGGATCGTGATCATCCGACAGAAAATGCTAGTGAAGTAGTGCATGATTAA 1173 0.4425 MVDVQDDMVHRLKPAVLMVASQIAFAGLLVLYKLAVNDGMNLRVIIAYRFIFATLFIAPLAFILERNKRPKMTWTILFHAFLCGLFGGVLSQNLHLEALALESATFASAVSNLVPAITFIMAVSFRLERLNLRTAAGKAKIIGTIIGISGAMILTLFKGKEINTGFFHITLLHHHKRHVSSSHSSSGKSLLGALCGLGSCFTYALWIIIQTKMSESYPCHYSSTALMSLMGSLLSIASALCLERDWTQWKLGWNIRLLTAAYAGVVVSGIMVAVTTWCVHMRGPLYVSTFGPLLLVLMAFPGSFMLDEKLHLGSIIGGVMVICGLYVVLWGKDKEMKKMNHQLIVSSESLHDELKVTRSPAEDKICPYNDVEVFRDRDHPTENASEVVHD 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0476 390 Pfam EamA-like transporter family 13 148 IPR000620 GO:0016020
Prci3g0476 390 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020
Prci3g0476 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 48 156 - -
Prci3g0476 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 334 - -
Prci3g0476 390 PANTHER WAT1-RELATED PROTEIN 13 341 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0476 Prci-Chr3 5982252 5987953 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0476 12 380 Nodulin-like Gene Family AT1G25270 40.970 2.84e-98 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0476 - - gmx:100787839 448.743