Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0473 ATGGCGAAGATGGCTGGAGTTGGGGATGTAGTTGAGGGGTTGAAGCCGGCGATGTTAATGGTGGTGCTTCAGTTAACATACGCCGGAATCAATGTTCTGTACAAGCTTGCCGTCAACGACGGCATGAACCTCAGAATCCTCATTGCTTATCGCTATATGTTCGCCACTCTCTTTATTGCTCCTCTCGCTCTCTTTCTCGAAAGGAGTAAAAGGCCAAAGATGACTTGGAGCGTACTTTTTCAGGCATTTCTGTGTGGGGTATTCGGAGGAGTAATGTCACAAAGCTTTTACTTGGAGTCATTGGCTTTAACATCTGCAACCTTTGCTTCGGCCATGGCCAATCTCACCCCAGCCATCACCTTTCTCATGGCCGTCTCCTTCAGCTTGGAAAGACTGAGTGTAAGAACAGTAGCAGGACAACTCAAGATCATTGGAACAATAATAGCAATAGGAGGGGCTATGGTCCTAACATTCTTGAAAGGGACAAAAATTGACACAGGCTCCTTCCACGTGATCCTCTTGCATCAACATAAGGGACACGTGGCATCACCACTAGCTCCCTCTAGCATTAAGGCTCTCTTGGGTGCCCTTTGTTCTCTAGGAAGCAGCGCCACTTATGCTTTATGGCTCATCATCCAGGCGAAGATGAGCAAGAGTTACCCATATTATTATTCAAGCACGGCTTTAATGAGTTCAATGGCAGCATTGTTTTCAACTGCATTTGCTTTTTGTTTTGAGAGTGATCTGACTCAATGGAAGTTGGGTTGGAATATTAGGCTTCTCACAACAGCCTATGCGGGAATAGTTGTGTCTGGAATAATGGTGGTGGTGATGGCATGGTGTGTGAACATGAAAGGCCCTCTTTATGTATCTGCTTTCAACCCTCTTTTGCTTGTCTTTGTGGCCATTGCTGGCTGTTTAATGTTGGACGAGAAGCTATATCTTGGAAGTATAATAGGAGGAATATTGATAGTGTGTGGATTATACTTGGTTTTGTGGGGAAAAGGCAAAGAGATGAAGAAGATGAATCAACTTATTCCATCTCAAAACCTCGATGAAGTCATTGTGATGAGATCACCGCCAACGGATGATAAAATCAACCGTCATCATAACAATTGTGAAGTTGAATTTGCTAAGGATTGTGATCATTCAATCATTCATCAAAATATGCAAGTGAAGTAG 1182 0.4374 MAKMAGVGDVVEGLKPAMLMVVLQLTYAGINVLYKLAVNDGMNLRILIAYRYMFATLFIAPLALFLERSKRPKMTWSVLFQAFLCGVFGGVMSQSFYLESLALTSATFASAMANLTPAITFLMAVSFSLERLSVRTVAGQLKIIGTIIAIGGAMVLTFLKGTKIDTGSFHVILLHQHKGHVASPLAPSSIKALLGALCSLGSSATYALWLIIQAKMSKSYPYYYSSTALMSSMAALFSTAFAFCFESDLTQWKLGWNIRLLTTAYAGIVVSGIMVVVMAWCVNMKGPLYVSAFNPLLLVFVAIAGCLMLDEKLYLGSIIGGILIVCGLYLVLWGKGKEMKKMNQLIPSQNLDEVIVMRSPPTDDKINRHHNNCEVEFAKDCDHSIIHQNMQVK 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0473 393 PANTHER WAT1-RELATED PROTEIN 15 343 IPR030184 GO:0016020|GO:0022857
Prci3g0473 393 Pfam EamA-like transporter family 194 332 IPR000620 GO:0016020
Prci3g0473 393 Pfam EamA-like transporter family 16 148 IPR000620 GO:0016020
Prci3g0473 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 237 337 - -
Prci3g0473 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0473 Prci-Chr3 5956758 5962324 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0473 14 379 Nodulin-like Gene Family AT1G25270 40.327 2.46e-92 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0473 - - tpra:123910665 431.795