Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0453 ATGAGGGACGTGAGTGAGGTGGTGGATGGGTTGAAACCAACCATACTAATGGTGGTGGTTCAGATACTGTACGTTGGGATTAACATTCTTTACAAACTCGTCGTGTACGATGGCATGAACTTGCGAATTGTCATAGCTTATCGTTTTGTCTTCGCCACAGCTTTCATGGCTCCTCTTGCTTTCATTTTCGAAAGGAAGAAGAGGACAAAGATGACTTGGACAATACTGTTTCAGGGGCTTATATCTGGCTTATTTGGGGGAACATTGGCACAGACGTTATATTTGGCGACGTTGGCCTTAACAACAGCAACGTTTGCATCGGCAATGAACAATCTCACTCCAGCCATTACCTTTGTCATGGCCCTCTTCTTCGGCTTAGAAAAGTTCAACTGGAGAGCAGCAGCAGGGAAAGCTAAGATGATTGGAACCCTTATAGGAATTGCTGGGGCCATGCTTCTAACATTCTACAAAGGAGCACGAATCCCCACTCCCTCCTTCCACGTCATCCCTTTACACCCCCACAGTAGCCACGTGGCATCTTCCCACATTTCCTCCAGCGGTAACACCCTCTTGGGTGCACTCTGTGCCTTGGGCGGTATCTGCTCGTTTTCTTTGTGGCTCATGGTTCAGAGCAAGATGAGTGAGAAATATCCATGTCATTACTCAAGCACGACATTGATGAGTTTGTCAGCTTCAGTGTTTTCTACTGCCTTTGCTCTGTGCACTGAAAGAGATTGGGCTCAATGGAAATTAGGTTGGAATATAAGGCTCTTAACTGTGGCTTATGCGGGACTGGTGCCAGCAGGAGTGAATGTGGTGATGATAGCATGGTGTGTACACAAAAGAGGGCCTTTGTTCGTATCAGTGTTCAGTCCTCTCTTGCTTTTGTTTTTGGTTTTTGTTGGATCTTTCTTTATGGACGAGATGCTTCATCTTGGAAGTATAATTGGAGGTGTGCTGATAGTGTGTGGACTGTACATAGTTTTATGGGGCAAAGCCAAAGAGACGAAGAAGATGAATCTCTCAGTACCATCACAGACCCTCCACGTGTCATCAACCCCTTCACTTGAAATCATCGTCAAATCTTCTACCCATGGCCACAAGAGCAGCTACAATTTTAATAATATTAATATTAGTACTTCAAGCCAAGAATATTCACCAGAAAATGGAAATCAAGCACTACGAAATGGGAAAAATCACGTCACATCACTATAA 1215 0.4453 MRDVSEVVDGLKPTILMVVVQILYVGINILYKLVVYDGMNLRIVIAYRFVFATAFMAPLAFIFERKKRTKMTWTILFQGLISGLFGGTLAQTLYLATLALTTATFASAMNNLTPAITFVMALFFGLEKFNWRAAAGKAKMIGTLIGIAGAMLLTFYKGARIPTPSFHVIPLHPHSSHVASSHISSSGNTLLGALCALGGICSFSLWLMVQSKMSEKYPCHYSSTTLMSLSASVFSTAFALCTERDWAQWKLGWNIRLLTVAYAGLVPAGVNVVMIAWCVHKRGPLFVSVFSPLLLLFLVFVGSFFMDEMLHLGSIIGGVLIVCGLYIVLWGKAKETKKMNLSVPSQTLHVSSTPSLEIIVKSSTHGHKSSYNFNNINISTSSQEYSPENGNQALRNGKNHVTSL 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0453 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 157 - -
Prci3g0453 404 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 334 - -
Prci3g0453 404 MobiDBLite consensus disorder prediction 383 404 - -
Prci3g0453 404 PANTHER WAT1-RELATED PROTEIN 13 341 IPR030184 GO:0016020|GO:0022857
Prci3g0453 404 Pfam EamA-like transporter family 191 329 IPR000620 GO:0016020
Prci3g0453 404 Pfam EamA-like transporter family 15 154 IPR000620 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0453 Prci-Chr3 5750752 5804343 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0453 11 337 Nodulin-like Gene Family AT1G25270 43.902 2.25e-94 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0453 - - gmx:100787839 406.757