Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci3g0449 | ATGGCGTCTGCTAGCCTTGGAAACGGTGGGGCCAGCAGTTCAAGGTCTGTTAATGGCTTCAGGGGTTCATCTAGTTCAGTGGATTGGCTCGGCAGAGAGATGCTTGAATTGAGGTTGAGGGACAAGATTGACCAGGACGAGGACAGAGAAAGTGAGCCTGACATTATTGATGGTGTTGGTGCCGAAACAGGACATGTGATAAGAACAAGCATTGGTGGTCGAAATGGTCAATCCAAGCAGAATGTCAGCTACATTGCAGAACATGTGGTTGGAACAGGCTCTTTTGGTGTTGTCTTTCAGGCAAAATGTAGAGAAACTGGAGAGATTGTGGCCATCAAGAAGGTTCTTCAGGACAAGCGCTACAAGAACAGAGAGTTACAGATTATGCAAATGCTGGATCATCCAAATATTGTTGCCCTTAAGCATTGCTTCTTTTCAACAACTGACAAAGAAGAGCTTTACTTGAATCTTGTTCTTGAATATGTTCCTGAAACTGTTAACCGAATGGCAAGGAGCTATAGCAGGATGAACCAGCGAATGCCTTTAATATATGTCAAGCTTTATACATACCAGATTTGCAGGGCCCTTGCTTATATACATAACTGTATTGGAATATGTCATCGTGACATTAAACCTCAGAACTTACTGGTGAACCCGCACACACATCAGCTTAAACTTTGTGATTTTGGAAGTGCAAAAGTGTTGGTGAAAGGAGAACCAAATGTTTCTTATATCTGTTCAAGATACTATCGTGCCCCAGAACTTATATTTGGTGCCACGGAGTATACAACTGCTATAGATATATGGTCAACTGGTTGTGTGATGGCTGAACTACTTCTTGGACAGCCTTTGTTTCCTGGAGAAAGCGGAGTTGATCAACTAGTTGAAATCATCAAGGTTTTGGGAACTCCAACCCGGGAAGAGATAAAATGCATGAACCCAAATTATACTGAATTTAAGTTTCCGCAAATCAAACCTCATCCATGGCACAAGGTTTTTCAGAAACGTTTGCCCCCAGAAGCAGTTGATCTTGTATGCAGATTCTTTCAGTATTCTCCCAATTTACGATGCACTGCTTTGGAAGCTTGCATTCATCCCTTCTTTGATGAATTGAGGGACCCAAACACCCGCCTTCCTAATGGCCGCCCACTTCCTCCTTTGTTTAATTTTAAATCCCAAGAGCTGGTGGGTATACCACCTGATATCATCAATCGGCTAATTCCGGAGCATGCTCGTAAGCAGAACTTATTTATGGCTTTGAACACCTAG | 1269 | 0.4279 | MASASLGNGGASSSRSVNGFRGSSSSVDWLGREMLELRLRDKIDQDEDRESEPDIIDGVGAETGHVIRTSIGGRNGQSKQNVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRMARSYSRMNQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACIHPFFDELRDPNTRLPNGRPLPPLFNFKSQELVGIPPDIINRLIPEHARKQNLFMALNT | 422 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci3g0449 | 422 | FunFam | Glycogen synthase kinase-3 beta | 68 | 163 | - | - | |
Prci3g0449 | 422 | FunFam | Shaggy-related protein kinase kappa | 164 | 412 | - | - | |
Prci3g0449 | 422 | SUPERFAMILY | Protein kinase-like (PK-like) | 83 | 395 | IPR011009 | - | |
Prci3g0449 | 422 | Gene3D | Transferase(Phosphotransferase) domain 1 | 164 | 412 | - | - | |
Prci3g0449 | 422 | SMART | serkin_6 | 84 | 368 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci3g0449 | 422 | ProSiteProfiles | Protein kinase domain profile. | 84 | 368 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci3g0449 | 422 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 205 | 217 | IPR008271 | GO:0004672|GO:0006468 | |
Prci3g0449 | 422 | ProSitePatterns | Protein kinases ATP-binding region signature. | 90 | 114 | IPR017441 | GO:0005524 | |
Prci3g0449 | 422 | CDD | STKc_GSK3 | 79 | 371 | IPR039192 | - | |
Prci3g0449 | 422 | PANTHER | GLYCOGEN SYNTHASE KINASE-3 ALPHA | 50 | 414 | - | - | |
Prci3g0449 | 422 | Gene3D | Phosphorylase Kinase; domain 1 | 69 | 163 | - | - | |
Prci3g0449 | 422 | Pfam | Protein kinase domain | 86 | 368 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci3g0449 | 422 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci3g0449 | Prci-Chr3 | 5623566 | 5630314 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci3g0449 | 90 | 376 | Core Cell Cycle Gene Families | AT1G76540 | 35.254 | 1.22e-57 | 190 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_GSK | Prci3g0449 | Pkinase | 8.6e-65 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci3g0449 | K03083 | - | jre:108983720 | 828.55 |