Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0447 ATGGCGTCTGCTAGCCTTGGAAACGGTGGGGCCAGCAGTTCAAGGTCTGTTAATGGCTTCAGGGGTTCATCTAGTTCAGTGGATTGGCTCGGCAGAGAGATGCTTGAATTGAGGTTGAGGGACAAGATTGACCAGGACGAGGACAGAGAAAGTGAGCCTGACATTATTGATGGTGTTGGTGCCGAAACAGGACATGTGATAAGAACAAGCATTGGTGGTCGAAATGGTCAATCCAAGCAGAATGTCAGCTACATTGCAGAACATGTGGTTGGAACAGGCTCTTTTGGTGTTGTCTTTCAGGCAAAATGTAGAGAAACTGGAGAGATTGTGGCCATCAAGAAGGTTCTTCAGGACAAGCGCTACAAGAACAGAGAGTTACAGATTATGCAAATGCTGGATCATCCAAATATTGTTGCCCTTAAGCATTGCTTCTTTTCAACAACTGACAAAGAAGAGCTTTACTTGAATCTTGTTCTTGAATATGTTCCTGAAACTGTTAACCGAATGGCAAGGAGCTATAGCAGGATGAACCAGCGAATGCCTTTAATATATGTCAAGCTTTATACATACCAGATTTGCAGGGCCCTTGCTTATATACATAACTGTATTGGAATATGTCATCGTGACATTAAACCTCAGAACTTACTGGTGAACCCGCACACACATCAGCTTAAACTTTGTGATTTTGGAAGTGCAAAAGTGTTGGTGAAAGGAGAACCAAATGTTTCTTATATCTGTTCAAGATACTATCGTGCCCCAGAACTTATATTTGGTGCCACGGAGTATACAACTGCTATAGATATATGGTCAACTGGTTGTGTGATGGCTGAACTACTTCTTGGACAGCCTTTGTTTCCTGGAGAAAGCGGAGTTGATCAACTAGTTGAAATCATCAAGGTTTTGGGAACTCCAACCCGGGAAGAGATAAAATGCATGAACCCAAATTATACTGAATTTAAGTTTCCGCAAATCAAACCTCATCCATGGCACAAGGTTTTTCAGAAACGTTTGCCCCCAGAAGCAGTTGATCTTGTATGCAGATTCTTTCAGTATTCTCCCAATTTACGATGCACTGCTTTGGAAGCTTGCATTCATCCCTTCTTTGATGAATTGAGGGACCCAAACACCCGCCTTCCTAATGGCCGCCCACTTCCTCCTTTGTTTAATTTTAAATCCCAAGAGCTGGTGGGTATACCACCTGATATCATCAATCGGCTAATTCCGGAGCATGCTCGCTGTAAATCATCTGGTGCATCTGACAGAGAATTTCACAGAAAGAGTTCATAG 1287 0.4281 MASASLGNGGASSSRSVNGFRGSSSSVDWLGREMLELRLRDKIDQDEDRESEPDIIDGVGAETGHVIRTSIGGRNGQSKQNVSYIAEHVVGTGSFGVVFQAKCRETGEIVAIKKVLQDKRYKNRELQIMQMLDHPNIVALKHCFFSTTDKEELYLNLVLEYVPETVNRMARSYSRMNQRMPLIYVKLYTYQICRALAYIHNCIGICHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNVSYICSRYYRAPELIFGATEYTTAIDIWSTGCVMAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYTEFKFPQIKPHPWHKVFQKRLPPEAVDLVCRFFQYSPNLRCTALEACIHPFFDELRDPNTRLPNGRPLPPLFNFKSQELVGIPPDIINRLIPEHARCKSSGASDREFHRKSS 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0447 428 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 50 412 - -
Prci3g0447 428 FunFam Glycogen synthase kinase-3 beta 68 163 - -
Prci3g0447 428 FunFam Shaggy-related protein kinase kappa 164 412 - -
Prci3g0447 428 SUPERFAMILY Protein kinase-like (PK-like) 83 394 IPR011009 -
Prci3g0447 428 Pfam Protein kinase domain 86 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g0447 428 Gene3D Phosphorylase Kinase; domain 1 69 163 - -
Prci3g0447 428 Gene3D Transferase(Phosphotransferase) domain 1 164 412 - -
Prci3g0447 428 SMART serkin_6 84 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g0447 428 ProSiteProfiles Protein kinase domain profile. 84 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g0447 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Prci3g0447 428 ProSitePatterns Protein kinases ATP-binding region signature. 90 114 IPR017441 GO:0005524
Prci3g0447 428 CDD STKc_GSK3 79 371 IPR039192 -
Prci3g0447 428 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0447 Prci-Chr3 5623566 5630315 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0447 90 371 Core Cell Cycle Gene Families AT1G76540 35.862 1.47e-57 190
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Prci3g0447 Pkinase 9e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0447 K03083 - jre:108983720 811.216