Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0433 ATGGCTTCTCATTCTCACCCTTCCAGCCCTATCTGTTTCTTCAAGATCATCTTGAAATCCAATCTTGAATCCATTAGGATTCCAAACAAATTTACTGGGAGATATGGAAGTGGTTTGTCAAACCCAGTGTTTCTAAAGCCTCCTGATGGGAAAGAGTGGAAAATGCATCAGACAAAACATGACAATGAGATTTGGTTTCAAGAGGGTTGGAAGGAATTTGCCAGCTTTTACTCTTTGGATGAAGGGCATTTGGTTTTGTTCAAATATGAAGGAACTTGTCAGTTTGATGTACACATATTCGATAAGAGTGCACTAGAAATAGACTATCCTTCTTCATCTAAGAATAATCTCAGTGATGATACACTTGAAATCTTGGATGAGATGCCTCCAAACCAAAAGGCTACGCACAAAACGCCTTTGTCATCTTCTAGGCCTTGTAAGAAAATGAGAAGTCTGCAGAATTTGCCGGTGGCCTTCAAAACTAATCCCGGCCAGTGTCAAGGAACAGAGTTCCAGAAATCAACCAATGCAGAATTGAAGCTTTGTAAGCAGGAACCAGAGGATGATGGGGAATCAGGAATTTTTACCAAGAGTACTGCCTGCTTGAATTCTGAGCAAAGAAGGAAGAAAGCGACAACTACCGTGGAAAAGATCAGAGCTTTAATCAGTGCCAGTTCTTTCAAATCTGAAAATCCCTTTTTCAAGGTAGTCATGCAGCCTTCACATGTCAGTGGTAAATGTTACTTGGTGATGCCTATAAAATTTGCTAAAAGACATTTGAAGAAAGAGTGTGGTGTTGTGCAACTTGAGGTCTTGGATGGGAGAACTTGGCCTGCTAGGTATAAGATTCCCATAATTGGAGTTGGATGGGAGAAATTTGTAATGGATAATGGTTTGAACGTGGGTCATGTTTGTGTTTTTGAAATGATCGGTCGCACATTCAAAGTACATATTTTCAGAGACGATGAAGAAGGAAATCTGAATGTTATTCCTTTTAAAGATGAGCAAATCAGCAGTTTGCAACAGACTCCTCTTGAAGAGGCTAGCTCTTTCAAATCTGAACATCCTCATTTTATGGTTAAGATGACACATGCTTACATTTTTCGTGGCTCAAACTTGCATGTGCCAACAAAATTTGCAAGAACACATTTTGATAAGAGTACTAAGAGCGCCAAGCTTGTTGTAAAAGATGTAGCTTGGCCTATTGGTTGCATATTCAGAAGAGATTCTCATGGATGTCAACTTCATGAATTTTCTTCTCGGGGATGGAAGCAATTTCGTGCAGATAATGATTTAAAAGTAGGAGATGTTTGTGTCTTTGAGCTCATTCCAGAAACAGAGTTCAAACTTACATTTCAAGTTACAATCTTTGGAGCCACTAAACACCCAATTCAATCATCCAACTCAGCTTAA 1413 0.3928 MASHSHPSSPICFFKIILKSNLESIRIPNKFTGRYGSGLSNPVFLKPPDGKEWKMHQTKHDNEIWFQEGWKEFASFYSLDEGHLVLFKYEGTCQFDVHIFDKSALEIDYPSSSKNNLSDDTLEILDEMPPNQKATHKTPLSSSRPCKKMRSLQNLPVAFKTNPGQCQGTEFQKSTNAELKLCKQEPEDDGESGIFTKSTACLNSEQRRKKATTTVEKIRALISASSFKSENPFFKVVMQPSHVSGKCYLVMPIKFAKRHLKKECGVVQLEVLDGRTWPARYKIPIIGVGWEKFVMDNGLNVGHVCVFEMIGRTFKVHIFRDDEEGNLNVIPFKDEQISSLQQTPLEEASSFKSEHPHFMVKMTHAYIFRGSNLHVPTKFARTHFDKSTKSAKLVVKDVAWPIGCIFRRDSHGCQLHEFSSRGWKQFRADNDLKVGDVCVFELIPETEFKLTFQVTIFGATKHPIQSSNSA 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0433 470 ProSiteProfiles B3 DNA-binding domain profile. 358 460 IPR003340 GO:0003677
Prci3g0433 470 Gene3D - 7 104 IPR015300 -
Prci3g0433 470 Pfam B3 DNA binding domain 13 102 IPR003340 GO:0003677
Prci3g0433 470 Pfam B3 DNA binding domain 234 320 IPR003340 GO:0003677
Prci3g0433 470 Pfam B3 DNA binding domain 358 454 IPR003340 GO:0003677
Prci3g0433 470 SUPERFAMILY DNA-binding pseudobarrel domain 229 320 IPR015300 -
Prci3g0433 470 SUPERFAMILY DNA-binding pseudobarrel domain 351 458 IPR015300 -
Prci3g0433 470 PANTHER B3 DOMAIN-CONTAINING 225 452 - -
Prci3g0433 470 SMART B3_2 234 322 IPR003340 GO:0003677
Prci3g0433 470 SMART B3_2 358 460 IPR003340 GO:0003677
Prci3g0433 470 SMART B3_2 13 103 IPR003340 GO:0003677
Prci3g0433 470 SUPERFAMILY DNA-binding pseudobarrel domain 8 110 IPR015300 -
Prci3g0433 470 ProSiteProfiles B3 DNA-binding domain profile. 234 322 IPR003340 GO:0003677
Prci3g0433 470 CDD B3_DNA 356 457 IPR003340 GO:0003677
Prci3g0433 470 ProSiteProfiles B3 DNA-binding domain profile. 10 103 IPR003340 GO:0003677
Prci3g0433 470 Gene3D - 212 323 IPR015300 -
Prci3g0433 470 Gene3D - 338 461 IPR015300 -
Prci3g0433 470 CDD B3_DNA 232 320 IPR003340 GO:0003677
Prci3g0433 470 CDD B3_DNA 12 101 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0433 Prci-Chr3 5507914 5512658 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0433 341 457 B3 DNA Binding Superfamily AT3G18990 29.060 7.64e-13 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Prci3g0433 B3 5.3e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0433 - - pcin:129304822 973.385