Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0416 ATGGCCGGAGTTGCCCCATCTGGATCTCCCAAACAAGGGGAATGGATGAAGGGGAAATTGGTGGGATCAGGATCTTTTGGAACTGTTCATTTGGCCATGAGCAAATCCACAGGAGGACTCTTTGTTGTTAAATCAGCACATTCCAGGGCTGAATTTGCGGCTTTAGAGAATGAGGTTGAGATTCTCAAGAATCTAGAACCATCTCCTTATACAGTCCAATACTTAGGGTCAGAAAGAGATGGAGATGATCTCAATGTTCTAATGGAGTACATGGCTGGGGGTAGTTTGGCTGATATTGCAGAGAAATTTGGCGGATCATTACAAGAAGATGTGGTTCGTTTGTATACAAAAGAAATTCTTAAAGGCCTCAAATATCTTCATGGTAATGGGATTGTGCACTGTGACCTTAAGTGCAAGAATGTGCTTCTGGGGTCTTCTGGGGACATCAAATTGGCAGATTTTGGATGTGCAAGGAGGGTGGAGGACTTGAAAAATAAATGTTTGATGAAGAAAAAGAATAACAAGTCTTTGGAACATGTTAGTGGGACCCCTCTATGGATGGCTCCTGAAGTTTTGAGGAATGAAAAGCTTGATTTTGCTGCTGATATATGGTCTTTGGGATGTACTGTTATTGAAATGACTACTGGTAGGCCTCCTTGGGGTGCTTCTAATTATGATTCAAACCCAATGGCTGTTCTTTTGAAGATTGCCTGTGGTGATGAGATCCCTCAATTCCCAACCCATTTCTCGAAGGAGGGTCTGGATTTCTTAAGGAGATGTTTGGAGAGAGACTCAAGAAAAAGGTGGACATGTGAGGAACTTCTTAGGCACCCATTTATCTCAAGGGATTCATCTGAAACAACACCACCATCTTCATCCAAAGATACTGCTTCCTCACCAGTCTGTGTGTTGGGGATTTCAAGTTTTGAGGGTGCTTATGATTTGGATGAACCAGAAAGTCCAGAGGGAAATGATTTCTCAGTCAGAAACCCGTTCACATGTTGCAAAGATGGAAGAAAAGGAAGTGAAATGCAAAGGCATGGAGAAGAATGTGGATTATGTTCATCACAGAATTGGATTACTATCAGATCATGA 1095 0.4219 MAGVAPSGSPKQGEWMKGKLVGSGSFGTVHLAMSKSTGGLFVVKSAHSRAEFAALENEVEILKNLEPSPYTVQYLGSERDGDDLNVLMEYMAGGSLADIAEKFGGSLQEDVVRLYTKEILKGLKYLHGNGIVHCDLKCKNVLLGSSGDIKLADFGCARRVEDLKNKCLMKKKNNKSLEHVSGTPLWMAPEVLRNEKLDFAADIWSLGCTVIEMTTGRPPWGASNYDSNPMAVLLKIACGDEIPQFPTHFSKEGLDFLRRCLERDSRKRWTCEELLRHPFISRDSSETTPPSSSKDTASSPVCVLGISSFEGAYDLDEPESPEGNDFSVRNPFTCCKDGRKGSEMQRHGEECGLCSSQNWITIRS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0416 364 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 13 294 - -
Prci3g0416 364 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Prci3g0416 364 CDD STKc_MAPKKK 14 280 - -
Prci3g0416 364 Gene3D Transferase(Phosphotransferase) domain 1 11 307 - -
Prci3g0416 364 ProSitePatterns Serine/Threonine protein kinases active-site signature. 131 143 IPR008271 GO:0004672|GO:0006468
Prci3g0416 364 Pfam Protein kinase domain 17 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g0416 364 SUPERFAMILY Protein kinase-like (PK-like) 13 304 IPR011009 -
Prci3g0416 364 ProSiteProfiles Protein kinase domain profile. 15 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci3g0416 364 SMART serkin_6 15 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0416 Prci-Chr3 5338197 5340122 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0416 7 304 MAP Kinase Kinase Kinase AT5G55090 44.884 1.65e-73 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Prci3g0416 Pkinase 1.9e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0416 K20716 - pcin:129306931 738.799