Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0402 ATGAAACGTGAAAGAAACTTACAAGAAGCTGAGGAAGATCCTGTAGATCTTGAGAAGAACGGAGCAGAAGATCAGATTAGTGAAAGATCTAATGATGAATCCAATCAAGAATCTGATGACCCATGTGACAACGATGATCCTCACGAAGATCAGAATGAGAGAGATAATGCAGCAGATTATCCAATTTCCAGAGAAGAAGTTGATATCAGCCAATGTATAAGCCATTTCAGTATAATCGTTAGCATCATGAAACGTAAACGAAACCTACAAGAAGCCTATGAAGATCCACATGATCATCTTGAGAAGGATGGAGTAGAAGATCAGATAATCAGTACTGTAAGAGCTGATGATGAATCCATTCAAGAAGCTGATCCCACTGACAACGATCTTCACGAAGATCGGAACGGGAGAGATAGGGACGAAAATCCTGACATTGATGATGCTGGACAGAGGGAAACATACGAAAGTGATCAGGAATCCAATGATGGGGATGATCAATCGCATCGTGTCTTACAAATTATGGATGCAGAAAACTATTTGAAAGCAGTGAAAGAAACATTTCATAGCAAAAGGGAAAAATATGAATTGTTCGTAGCAATCTTGAGAGATTTCAAGGCTGAAAGGATTAACATTGCAGATTTCTTAGAAAAGATGAAGGAAGTATTGGATGGGCATGAATTTTTGATTTTGGGATTAAATGTCTTCTTGCCCAAAAGATATCAGATCCCTCCTTCTCATGAACAACGTCTCAATCTTCCTGATAATGTTCATAAATCTGAGATTCAAGTTCAAAAGAAGCCCAGGAAGAAGAAAACTAAAGGCGATGGTAAATCATCAGTTCAAGAAATCGATCTTAGCAAATGTCAACGTTATGTCAGCTACGTGCGTCTTCCTGAAAAAGAAGGTGAAGGCTTTAAAGATGTTGAAGAAAATGCTTCTGATGACGATGAGACTGATTCAGTCTCGCAGTATTTCCATGGTGAAGATCATGTCGGTCCATAA 1002 0.3862 MKRERNLQEAEEDPVDLEKNGAEDQISERSNDESNQESDDPCDNDDPHEDQNERDNAADYPISREEVDISQCISHFSIIVSIMKRKRNLQEAYEDPHDHLEKDGVEDQIISTVRADDESIQEADPTDNDLHEDRNGRDRDENPDIDDAGQRETYESDQESNDGDDQSHRVLQIMDAENYLKAVKETFHSKREKYELFVAILRDFKAERINIADFLEKMKEVLDGHEFLILGLNVFLPKRYQIPPSHEQRLNLPDNVHKSEIQVQKKPRKKKTKGDGKSSVQEIDLSKCQRYVSYVRLPEKEGEGFKDVEENASDDDETDSVSQYFHGEDHVGP 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0402 333 MobiDBLite consensus disorder prediction 319 333 - -
Prci3g0402 333 MobiDBLite consensus disorder prediction 47 62 - -
Prci3g0402 333 Gene3D Paired amphipathic helix 175 237 IPR036600 GO:0006355
Prci3g0402 333 FunFam Paired amphipathic helix protein Sin3 175 237 - -
Prci3g0402 333 MobiDBLite consensus disorder prediction 113 167 - -
Prci3g0402 333 MobiDBLite consensus disorder prediction 1 63 - -
Prci3g0402 333 ProSiteProfiles PAH domain profile. 169 239 IPR003822 GO:0006355
Prci3g0402 333 MobiDBLite consensus disorder prediction 1 36 - -
Prci3g0402 333 MobiDBLite consensus disorder prediction 246 281 - -
Prci3g0402 333 SUPERFAMILY PAH2 domain 172 238 IPR036600 GO:0006355
Prci3g0402 333 PANTHER SIN3B-RELATED 171 270 IPR039774 GO:0003714
Prci3g0402 333 MobiDBLite consensus disorder prediction 302 333 - -
Prci3g0402 333 Pfam Paired amphipathic helix repeat 192 236 IPR003822 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0402 Prci-Chr3 5174083 5176567 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0402 175 242 WRKY Transcription Factor Family AT4G12020 42.647 3.33e-10 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci3g0402 PAH 5.8e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0402 K11644 - pcin:129304767 660.603