Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0349 ATGACCATGGGTAATCCTGTTTTTGTGGAGTGGGAAGAACAAATTATATGCCAGGAGCGTGGGAATCGTGTAACTCACTTCTACTTAAGGGATGCATCAGGGAATTCAGTGCTTGCTGTAGTGGGCACCGAGAGGAGTATAAGGCATATGATGTATGTTGTGTCAGACGAATTTTTGCAGGCTTATGGATCCAGAGATATCATTTCTGGGTGTAAATGGCGGGCTAGAAGAGAGGTGGTAGACTGGCTGACATGTTTGGTATCGAGGAATAGACATCAACATATGGATGATTTGGATGCACTGATGAATGATTCGGCACAAGCTGTAAATTCTCTTGAAGCATTAACAACTGGAACCAGTGCTAATAAAACGTATTCATCTTACAAGATGGTTTCTAGGAAGTTGAAAATTCAAAGTTCCGACATTGAATGGTCAGGCACTTCTTGGTTTTGTGCTAAGCAGCTTAAGCACTACTCAGGATTTTGTAGGAACGGGACAACTATTTATGTTCATTCATTTGTATATATCATGGCTGAAGAAGAAATTCAGTATCTTGGTTACATAGAAGACATGTATGAGGATAAGAAGGGGCAGAAAAAGGTCAAAGTAAGGTGGTTTCACCATGGTCAGGAAGTTAAGCAGGTTATGCCACAGCTGAATCTGCAACCTGGAGAAGTTTTTATCACATCTCATGTTCAAGTGGTTAGTGCTGATTGCGTCAATGGTCCTGCAATTGTTTTGAGTCCTAAGCATTATGAGAAATGCTTGCTTGCTGCATCACAAGCCTCTTCAGCTGATGTCCATGTATGCTCAAGGCAGTTTAAAAACAATAAGCTTAAGCCTTTCTCTCTCTCTAAGTTGCGTGGGTATTGTAACCAGTCCGTGCTTTCTTGTTTGAGTAGCCCTATCCTTTCTAAGAGAAAGGTGAAGCATCCAAAATTGCACAGAGAAGATGAAGAAGATCCTTCAAGGCCTAGCAGTAAGAGGAATAGAAGTTCTAAAGGGTACCAAATACTTGGAAAGGTTTCTTCTACTCTTCAAAACGCTGCCCGGAAGAATCAGATAACAGAATGTGAGCCAGTGTTCCCAATGCTAAAATTAAAACTGTCAAGAAAAACAATGGGTATTAAAGTTATCGGTCCTAAGCCCAAGAGTCATCCGTCTTTCAAGGATGATGATAGGATAGAGATTTTGTGTCAAGATAGTGGCATAAGAGGGTGCTGGTTTAGGTGTAAAATGTTACATACATCCCAAAAGAAGCTGAAGGTCCAGTATGAGGATATACTGGATGTAGATGGAAAGGGAAAGCTGGAGGAATGGATCCCTGCATATAGAGTGGCATCTCCTGATAAATTGGGTATTCGATGTACGGGCCGCTTTACAGTACGGCCACATCCTCCTGAAGATACTGCAGACCGTACTTTTGAGATTGGGATCCCAGTTGATGCTTGGTTGGGTGACGGTTGGTGGGAAGGGGTCATTACTGCAGTCAATGTTTGTGGAGTTGATACGCTGCAGGTTTATTCCCCTGGTGAAGGGAAGTTCCTTGTGCTTGAGAAGAAGAATATCAGGATTTCCCGAGACTGGGTTGGTGACAGGTGGGTTGATTTAACGGGGAAGCCTGACATTTGTAGCTTCTTATCTTCAAATGTTGCTTCCAGCATCCAGCCGTTACTTCAGTCCGCCGTGGCAGATGGATCTTTATCTGATTTTTCAACAACGACGGAGACTAAATTGTTGTCCATTCCCAAAACTGAGGTCCTAGACAAGGATGAGTCTCGATTATCTGGCTTCAGTGCATCGGATGACCAGGAAAATAGGGTGGTGGTCACGTTGGGAAAGCCTCTCGACGTCATTCATGAAGACCAAGATAATTACTCTCCTGATGCCAGTTTTGATGTCACTGACAAAGATGATACGAATGACAGCGATCAAGCCAGTGAGGACAAACTGAAGGTGGAGCAAAATTTTGAGTCTGCAAAACTAAAACTTGATGGGGCAGAAGCAATAGAAGTTGCATGA 2022 0.4293 MTMGNPVFVEWEEQIICQERGNRVTHFYLRDASGNSVLAVVGTERSIRHMMYVVSDEFLQAYGSRDIISGCKWRARREVVDWLTCLVSRNRHQHMDDLDALMNDSAQAVNSLEALTTGTSANKTYSSYKMVSRKLKIQSSDIEWSGTSWFCAKQLKHYSGFCRNGTTIYVHSFVYIMAEEEIQYLGYIEDMYEDKKGQKKVKVRWFHHGQEVKQVMPQLNLQPGEVFITSHVQVVSADCVNGPAIVLSPKHYEKCLLAASQASSADVHVCSRQFKNNKLKPFSLSKLRGYCNQSVLSCLSSPILSKRKVKHPKLHREDEEDPSRPSSKRNRSSKGYQILGKVSSTLQNAARKNQITECEPVFPMLKLKLSRKTMGIKVIGPKPKSHPSFKDDDRIEILCQDSGIRGCWFRCKMLHTSQKKLKVQYEDILDVDGKGKLEEWIPAYRVASPDKLGIRCTGRFTVRPHPPEDTADRTFEIGIPVDAWLGDGWWEGVITAVNVCGVDTLQVYSPGEGKFLVLEKKNIRISRDWVGDRWVDLTGKPDICSFLSSNVASSIQPLLQSAVADGSLSDFSTTTETKLLSIPKTEVLDKDESRLSGFSASDDQENRVVVTLGKPLDVIHEDQDNYSPDASFDVTDKDDTNDSDQASEDKLKVEQNFESAKLKLDGAEAIEVA 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0349 673 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 258 643 - -
Prci3g0349 673 MobiDBLite consensus disorder prediction 620 652 - -
Prci3g0349 673 MobiDBLite consensus disorder prediction 309 334 - -
Prci3g0349 673 SMART BAH_4 166 285 IPR001025 GO:0003682
Prci3g0349 673 CDD Tudor_Agenet_AtDUF_rpt1_3 389 467 - -
Prci3g0349 673 Pfam BAH domain 167 279 IPR001025 GO:0003682
Prci3g0349 673 Pfam Agenet domain 393 467 IPR008395 -
Prci3g0349 673 Gene3D - 149 362 IPR043151 -
Prci3g0349 673 ProSiteProfiles BAH domain profile. 166 285 IPR001025 GO:0003682
Prci3g0349 673 SMART agenet_At_2 473 531 IPR014002 -
Prci3g0349 673 MobiDBLite consensus disorder prediction 312 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0349 Prci-Chr3 4455163 4462576 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0349 401 529 PHD Transcription Factor Family AT5G58610 28.571 3.79e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0349 - - gmx:100816046 838.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci3g0349 3 4455163 4462576 Prci3g0349 3 4455163 4462576 ECH