Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0342 ATGGCAGAGATTTTGATTTCCATTGGGGCAAAGGTTGCAGAATATCTAGTGGATCCAATTATACATCGTGCTCGTTATTTGTTGTGCTTAAACCAATTCATTGGAGATGTTGAAAAAGCAAGAGAAGAGCTGGAGGGGAAACTAGAAGATGTGAAAAGGCAAAAGGAAGAAGTTGATAGAGAAACTAAAGAAATAATGCCCTCCGTGCAAAAGTGGTGGGATAATGTAGATGCAATTCTAGAGGATGTGCAAAAGCTACAACGAAAGGCTGAAGAAGGAGGAGCAAAGAAATGTTTTAATGTGCGACACAGGTATTCTTTAGCAAAAGAAATGGAAAATAAGGCTAATCGAATGAAGGAGCTCAAACAAAATTCAAACTTTGAGCCATTTTCCACTCGCATCCAACTTCCAAGCATGCCTAACTTTTCCACCAAAGACTTTGTGGATTTCAACTCGAGAAAATCAACATGCAATCTTATTTTAGAGGCCATTAAAGATGGCAAGAACAAGATAATTGGACTGTATGGCATTGGGGGCTCGGGTAAAACCACCTTGACCAAAAAGTTAGGTGATAAGGTCAAAGAATTGAAGCTGTTTGACAATTGCATCATTGTAGTTGTTTCAAAACCTCCCAATGTGCTGAAAATTCAACAGGATATAGCAGAGCAAATAGATTTCAAATTAAAGGAGCAATTGCAATTTAAAAGAGCAGAAACATTATCTTATAGATTAAGAAATAAGAAGATTTTTATAATCTTGGATGACGTGTGGAGCAAACTAAGCCTTGAAGAAATTGGCATTCCACATAATGAAGATTGTTGTGTCTTGTTAACCACTCGCCTTCGAAATGTATGTGTCTCTATGGATTGTCAAAGTATAACTGAACTGCCTCTCTTAATAGAGGAAGAGGCATGGTCTTTGTTCAAGATGCATGCTAACATAACCAATGAATTGAATGATGAGTTTGATGGAATTGGAAGGGAGATTGTTGATGAGTGTAAGGGTTTACCTATAGCAATTGTGACTGTAGGAAGCATGTTAAAAGGAAGGAGAACTTTTCGAGTATGGAAGTCAACATTAGGATGGCTACAACATCCTGCATCGCTAGATATTGAAGAAGATTTGAGGAGCCTTTATGCAGTTCTCAAAATAAGTTATGATTATTTGCCGAGTCAACTAGCCAAATCAATCTTCTTATTGTGCTCTATGTTTCCTGAGGATCATGAAATCCATGTAGAGGATTTAATTCGTTTTGGCAAGGGGACTCTTGAGCTAGATGAATGTATTTATACAATGGAGGATGCAAGGAATGAGATTTTAGCAACTATTGAGAAGTTGTTAGATTCTTGTTTGTTAATGCCCACCAATGAGCAAGCATGTGTAAAATTGCATGATGTGGTTCGTGATATAGCCTTATGGATTGCAAAGAAAGAATATCAAGCAATTTTGGTGGATAGAAATACAGTTTCAAGCATGTTGGATAAATATCAAAGTCTGAAAGATACAAAGGCACTATCATTGTGGAATTTGGATGAGAATTTCAAGCTCCCTAATCAATTGCATTCTCCAACACTTGAAATTCTACTACTTCATCATCAAGGGTCCATTGATCATCTTGGAGTGGTAGAAGCATTAAAAGTCTTGGTCTTCATAACATTTAGCTTTAAATGGACATCCAGGATGCCAAAAACTCAATTGTCAATTTTGCAATCAATTGTGTCATTAACAAATCTACACACCTTATGGCTTAGAGGAAAAGTATTGGGTGACATCTCTTTCTTGGGTGAACTTAAAAAATTAGAGATTTTTGACTTGCATGGTTCTCAATTTGATGAATTACCTGCTGGAATTGTATATATGAAAAAGTTGAAACTTTTGGATGTGTTTGGTTGTGAAATTGAGAAAAGTCCTTTAGGAGTAATTGGAAGATGTGAGCAACTGGAAGAATTATACTTATGGGATAAGAAATCAACTATCCCAAAAAATTTCTCTCTTTCAAGGTTGAAGAGGTATGTTATTTATGATTCTAGATTCGATATTCATGAGGTTCCTTTTCTAGAATATTTTGATGGTTGTGATGAAGCATTAAGAGCTTTATGTATACAAGACTTCAAATTCAATACTCTGAGTTCATCAATGAAAGATCTCATTCTTAGAGCAAATTGCCTTTGCCTGGAGAATTGTATGTGGGATCATAAAGATCTAAATTTAAAGATAAAACACTTAATGGTTTCATGTTGTCGGGAGAAAAGATTCATAATTGATAACTCTGATGTCAACAATCTTCAAACAAAACAAGTATTCTCCCACTTGACTACTTTAAGATTGAGAGAAATTATTAATCTTGAACAAGTTTTCCAAGATTCATCTATAGGGTGCTCTCTTCTGATGTTACAAGAGTTATTCATAGAAAGGTGTCCCAAATTGAGAACCTGCATCTTCACCCACGCTATTGTTATACCAAAGCTGAGAAAACTTGAGATATATGGCTGCGACAAAGTGAAATGGCTATTTCCTTATTCTCTTACTTGTCAATGTCCTTCACTAGAGGAATTGTGGATACACTCTTGCTCTAAACTTGAGAGGTTCATCGGTGTAGATGGTGATGATAAGATAAAACACGAGGATCAATTACTACAGCACCAAGGGGAGTTCCTTTATGATATGCAAGGTTTTCCATATGGGTATGAGATTGAGAGAGCAAACAACTTCAAGCAGCTACGAAATCAGAAGCCCTTGACCTTTTTCCTAAGTTTGAAATTTCTACAAATTAGAAATTGTAAAAGAATCAATGATATATTTGAAGTGCGAGTGACGAGAGAAGCACAAGATCCTAATTTGAAGCTGAATTCAGAGTTGTGTAAATTAAGATTACAAGATCTACCAAATTTGGAATATATTTGGAAGGGCCCCACACAAATTGTAAGCCTCCATAGACTTGAAAGAGTTGAATTGTGGAGTTGCCCAAGATTAAAAAGTATCTTCTCTCCTACTATCCTTACAAGCCTCCCAGAAGTGAGGCAACTTTTTGTATATGAATGCGAGGAATGGGAAGGAGTATTTTGTGAAGAATCACTTAAAAACCTTTCTTCTTCTTCTTCCTCCTCTAATGTATGCTTCCCTAAACTCAATGAGATTTCAATAGAGGGCTGCAACAAAGTGAAAAGACTATTATCTTATTCTCTGGCTTCTCATTGTCATTCACTAGAGTATATGATAATACATGAATGCTCTCAACTTGAGAGGCTTGTTGACGGAGACAATGATGAAGAATCAGCAAATGGGGATTGGCTACCACTGCTTCTCAAACTGAAGGAATTAACTCTAGTAATGTTGCCAACATTGAGAGACATTTTCACAGGAGAACTTGAGTACAAGCTGGAATGCCATCATGATAGACACAAAAAGAAGAATGACAGTGTAAGGCCAAAGGTGTTGAATTCAGAATTATGTTCTATACATTTAATGGATCTGCCGGAGTTGGAATTTATTTGGAAGGCCCCCACTCAAATTATAAGCCTCCATAGACTTCAAGAAGTTAAATTGTGGAGTTGCCGAAGATTAAAAAGTATTTTCACTCTTGCCATAATTACAAGCCTTCCAAAGTTGAAGAAACTTGGAGTAAAAGCATGCGATCAATGGGAAGGAGTATTTTGTGAAGAATCACTTCAAAACCTTTCTTCTGCTTCTTCCACGGTTTGCTTCCCCAGCCTTGAGAGAATTGGTATATATGATTGCAACAAAGTGAAAAGGTTGTTTTCTTATTCTCTAGCATCTCAATGCCCTTCATTAAAAAAAATAATTATAAATGACTGCTCTGAACTTGAGTGGGTTGTTCAAGGCTATGAAAGTGAACAAGTTACTGGTCATGATCAGAAACTATTTCCTAAATTGAATAAATTGGATCTCAGGAGGTTGCCAAAGTTGAGAGAGATTTATACAGGTTATGAATTCAATCACGTATCTGGTACTATGAGTATACAAGATTGTCCAAACATATACAACATCCCATTATAA 4017 0.3622 MAEILISIGAKVAEYLVDPIIHRARYLLCLNQFIGDVEKAREELEGKLEDVKRQKEEVDRETKEIMPSVQKWWDNVDAILEDVQKLQRKAEEGGAKKCFNVRHRYSLAKEMENKANRMKELKQNSNFEPFSTRIQLPSMPNFSTKDFVDFNSRKSTCNLILEAIKDGKNKIIGLYGIGGSGKTTLTKKLGDKVKELKLFDNCIIVVVSKPPNVLKIQQDIAEQIDFKLKEQLQFKRAETLSYRLRNKKIFIILDDVWSKLSLEEIGIPHNEDCCVLLTTRLRNVCVSMDCQSITELPLLIEEEAWSLFKMHANITNELNDEFDGIGREIVDECKGLPIAIVTVGSMLKGRRTFRVWKSTLGWLQHPASLDIEEDLRSLYAVLKISYDYLPSQLAKSIFLLCSMFPEDHEIHVEDLIRFGKGTLELDECIYTMEDARNEILATIEKLLDSCLLMPTNEQACVKLHDVVRDIALWIAKKEYQAILVDRNTVSSMLDKYQSLKDTKALSLWNLDENFKLPNQLHSPTLEILLLHHQGSIDHLGVVEALKVLVFITFSFKWTSRMPKTQLSILQSIVSLTNLHTLWLRGKVLGDISFLGELKKLEIFDLHGSQFDELPAGIVYMKKLKLLDVFGCEIEKSPLGVIGRCEQLEELYLWDKKSTIPKNFSLSRLKRYVIYDSRFDIHEVPFLEYFDGCDEALRALCIQDFKFNTLSSSMKDLILRANCLCLENCMWDHKDLNLKIKHLMVSCCREKRFIIDNSDVNNLQTKQVFSHLTTLRLREIINLEQVFQDSSIGCSLLMLQELFIERCPKLRTCIFTHAIVIPKLRKLEIYGCDKVKWLFPYSLTCQCPSLEELWIHSCSKLERFIGVDGDDKIKHEDQLLQHQGEFLYDMQGFPYGYEIERANNFKQLRNQKPLTFFLSLKFLQIRNCKRINDIFEVRVTREAQDPNLKLNSELCKLRLQDLPNLEYIWKGPTQIVSLHRLERVELWSCPRLKSIFSPTILTSLPEVRQLFVYECEEWEGVFCEESLKNLSSSSSSSNVCFPKLNEISIEGCNKVKRLLSYSLASHCHSLEYMIIHECSQLERLVDGDNDEESANGDWLPLLLKLKELTLVMLPTLRDIFTGELEYKLECHHDRHKKKNDSVRPKVLNSELCSIHLMDLPELEFIWKAPTQIISLHRLQEVKLWSCRRLKSIFTLAIITSLPKLKKLGVKACDQWEGVFCEESLQNLSSASSTVCFPSLERIGIYDCNKVKRLFSYSLASQCPSLKKIIINDCSELEWVVQGYESEQVTGHDQKLFPKLNKLDLRRLPKLREIYTGYEFNHVSGTMSIQDCPNIYNIPL 1338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0342 1338 Pfam NB-ARC domain 166 387 IPR002182 GO:0043531
Prci3g0342 1338 Gene3D - 130 294 IPR027417 -
Prci3g0342 1338 Gene3D Ribonuclease Inhibitor 1126 1337 IPR032675 -
Prci3g0342 1338 Gene3D Ribonuclease Inhibitor 694 866 IPR032675 -
Prci3g0342 1338 Gene3D Ribonuclease Inhibitor 902 1115 IPR032675 -
Prci3g0342 1338 Gene3D Ribonuclease Inhibitor 476 691 IPR032675 -
Prci3g0342 1338 PRINTS Disease resistance protein signature 171 186 - -
Prci3g0342 1338 PRINTS Disease resistance protein signature 243 257 - -
Prci3g0342 1338 PRINTS Disease resistance protein signature 333 347 - -
Prci3g0342 1338 PRINTS Disease resistance protein signature 618 634 - -
Prci3g0342 1338 FunFam Probable disease resistance protein At1g61300 137 292 - -
Prci3g0342 1338 SUPERFAMILY L domain-like 460 862 - -
Prci3g0342 1338 Gene3D - 386 472 IPR036388 -
Prci3g0342 1338 Coils Coil 30 64 - -
Prci3g0342 1338 Gene3D - 299 385 IPR042197 -
Prci3g0342 1338 Coils Coil 104 128 - -
Prci3g0342 1338 SMART AAA_5 168 318 IPR003593 GO:0016887
Prci3g0342 1338 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 902 1083 - -
Prci3g0342 1338 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 401 IPR027417 -
Prci3g0342 1338 SUPERFAMILY RNI-like 954 1278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0342 Prci-Chr3 4325342 4336197 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0342 170 478 WRKY Transcription Factor Family AT5G45050 24.528 4.05e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0342 - - pcin:129306241 2651.7