Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0335 ATGGCGGAAATCCAAGCAATCTCCACAACTTTGGTGCAAGCCAGAAGCCACAATAACAGCGACGTCGTTCCAAGAATGGACTTAACTCCATGGGATCTCCAACTTCTTGAAGTCGAAACCATCCAAAAAGGACTTCTCTTCCACAACCCTGAGTCTCAAGACACTTACATCCAACACCTTAAAGACTCTCTTTCTTCAACACTAGATTTTTTCGTTCCACTTGCTGGACGTCTCGCCATTTCTGAACATGACGATGATATTCTCGACTCCATCTACGTTCCTCGTGTTGTCCATTCCTTGTTTCCGCTGAACGGAGTGAAAAATATCGAAGGCACTTCTAAGCCATTGTTAGCTGTGCAAGTTACAGAGCTAGAAGACGGAATCTTCATCGGTTGTTCGATTAATCATTCTGTTGTTGACGGTAGGTCGTTTTGGCATTTCTTCAATTCTTGGGCTGAAATTTCTCGAGGTTTGGGCAGAATATCCAAGCTTCCTGCTCTTGAACGCTGGTTTCTTGAGGGGATCGAGCAACCTATTCGGTTTCTTTTCACAAAGGAAAATCAAAACTCCGATGGATTAATTCAGCCGCTGGCGCCACCGCCAGAGAGAGTGTTTCACTTTACAAAGGGAAAGATTTCTCAACTGAAATCAAAAGCCAACGCAGAGGTTAATTACACCAACAAAATATCATCTCTGCAAGCACTTTTAACTCATGTTTGGCGGTCTGCGATACGTAACCAACGTCTTGATCCAAAGGAAGATGTCAGTTTTTTCGTAATAATAGGTGCTAGACCCAGAATATTGAACCCACCATTACCGGAGAGTTATTTTGGAAATGCTGTGCATATCGGTAAAATGACCAAGAAGGTAGGGGAATTCCTTGAGGAAGGGCTTGGCAATACTGCTCTGGAAATGAACAAGATGATTTCTTTACACACAGAAGAGAAGATTAAGGATTTCTTGAAGTCTTGGATAAAAAAACCAGAGTTTTTAAGAGTTAGTGGGGTTAGAAGTGACAATAGATTGGTCACGAGCAGTTCTCCGAGGTTTGATATTTACGGAAATGACTTTGGTTGGGGCAAGCCTGTGGCGGTTCGAAGTGGTTCTGCAAATAAAGCTCGCGGAAAGCTGACTGTTTATCCTGGGGTAGAAGAAGGTAGTATTGACATTGAACTTTGCTTACGTTTCGAGGTTTTAGAGGCCTTGGCAAATGATCCTGATTTCATGAATTTTGCTTCTATCTAG 1245 0.4273 MAEIQAISTTLVQARSHNNSDVVPRMDLTPWDLQLLEVETIQKGLLFHNPESQDTYIQHLKDSLSSTLDFFVPLAGRLAISEHDDDILDSIYVPRVVHSLFPLNGVKNIEGTSKPLLAVQVTELEDGIFIGCSINHSVVDGRSFWHFFNSWAEISRGLGRISKLPALERWFLEGIEQPIRFLFTKENQNSDGLIQPLAPPPERVFHFTKGKISQLKSKANAEVNYTNKISSLQALLTHVWRSAIRNQRLDPKEDVSFFVIIGARPRILNPPLPESYFGNAVHIGKMTKKVGEFLEEGLGNTALEMNKMISLHTEEKIKDFLKSWIKKPEFLRVSGVRSDNRLVTSSSPRFDIYGNDFGWGKPVAVRSGSANKARGKLTVYPGVEEGSIDIELCLRFEVLEALANDPDFMNFASI 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0335 414 Pfam Transferase family 97 408 - -
Prci3g0335 414 Pfam Transferase family 3 82 - -
Prci3g0335 414 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 409 - -
Prci3g0335 414 Gene3D - 5 89 IPR023213 -
Prci3g0335 414 Gene3D - 90 190 IPR023213 -
Prci3g0335 414 Gene3D - 201 405 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0335 Prci-Chr3 4242681 4244266 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0335 45 400 Monolignol Biosynthesis Gene Families AT5G48930 25.000 8.48e-27 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0335 - - jre:108985765 487.648