Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0311 ACCATATCCAGAAGCGACTTCCGAATTTTGAAGGCTAATGGAATAAGGCTTATTCAATTTGGAATCGATGCCTTTAAGGCAGAACATGCCTGGGAAAGGGGAAGAGTTGACAAATCTGGGAGTATATTGGAACCTTTTGTTAACATTCCGGAGCATACAGTGCGTGAAGCATTGCAAGTAGTGCTTGATGTTAGGAACCACCCTGTGTTAATTCATTGCAAACGAGGAAAGCATCGCACCGGATGTATAGTGGGATGCTTAAGGAGGTTGCAGAGATGGTGTCTATCATCTGTGTTTGATGAGTACCAAAGGTTTGCTGCTGCCAAAGCTAGAGTGTCAGATCAGAGGTTTATTGAATTGTTTGACATTTCTGGTTTGAAGAACAATCCAATGTCATTTTCAAGCTCAAAAAAGTAG 417 0.4173 TISRSDFRILKANGIRLIQFGIDAFKAEHAWERGRVDKSGSILEPFVNIPEHTVREALQVVLDVRNHPVLIHCKRGKHRTGCIVGCLRRLQRWCLSSVFDEYQRFAAAKARVSDQRFIELFDISGLKNNPMSFSSSKK 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0311 138 Pfam Tyrosine phosphatase family 6 129 IPR004861 -
Prci3g0311 138 PANTHER TYROSINE-PROTEIN PHOSPHATASE 8 129 - -
Prci3g0311 138 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 7 123 IPR029021 -
Prci3g0311 138 ProSitePatterns Tyrosine specific protein phosphatases active site. 71 81 IPR016130 GO:0016311|GO:0016791
Prci3g0311 138 PRINTS Plant and fungal dual specificity phosphatase signature 49 63 IPR020428 GO:0016791
Prci3g0311 138 PRINTS Plant and fungal dual specificity phosphatase signature 15 29 IPR020428 GO:0016791
Prci3g0311 138 Gene3D Protein tyrosine phosphatase superfamily 1 125 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0311 Prci-Chr3 4015856 4018700 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0311 11 138 Protein tyrosine phosphatase (PTP) family AT4G03960 64.844 1.96e-58 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0311 K18045 - cave:132182501 194.512