Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0295 ATGGCAACTCTGTTCTTCAACTCACTCTTATTATCATCACTTCTACTTCTTCATCAATTCTTTTTTTCCTCTTCGGTTTCTGCTTATTCTTTCAATGACGTCAAATTATGGTGCAGCCAAACTCCTAATCCTCAGCCATGTGATCACTTCTTGAATCAACACACGAATCTCCAACACAAACCTATCAACAACAAAGATGATTTCTTCAAGCTTTCTCTACAGCTCGCCCACGACCGCGCTCTGGCCGGCCATGAAAATGCTGTTTCGCTTGGCCCAAGGTGTCGGAATCAAAGGGAAAAGGCTGCATGGGCGGATTGCCTAGAGTTGTATGAGCACACCATCCACAAACTCAACAAAACCCTAGACCCTAACACCAAGTGCACCCAAGCTGATACACAGACATGGCTCAGCTCAGCTCTTACAAATCTTGAGGCCTGTAAAGACGGGTTTTACGAACTTGGGGTTCAAGACAATGTGTTGCCTTTAATGTCCAACAATGTCACCAAGTTGCTGAGCAATACTCTGGCTTTAAACAAGGTTCCATATGATGACAAACCAAGTTACAAAGATGGGTTCCCGACATGGGTCAAGCCGGGTGACAGGAAGTTATTGCAGAGTTCTTCTCCATCTTCTCAGGCCAATGTCATCGTGGCGAAAGACGGGTCGGGACATTTCACGACAGTTAGTGCCGCCATTGGTGCTGCACCGAAGAGCAACAGTGGGAGGTATGTGATATACGTGAAGGCAGGTATATATAACGAACAAGTTGAGATAAAATTGAAGAATATAATGTTAGTGGGAGATGGTATTGGAAAGACTATCATTACTGGGAGCAATAGTGTTGGAGGAGGCACAACCACCTTCCGTTCTGCAACTGTTGCTGTTGTTGGGGATGCCTTTATTGCGCAAGACATAACATTTAGGAACACTGCTGGAGCATCAAACCACCAAGCTGTGGCTTTACGTTCAGGTTCAGACTTATCAGTATTCTACAAATGTAGTTTTGAAGGATTCCAAGACACATTATATGTGTTCTCTCAGAGACAGTTTTATAGGGAATGTGACATTTACGGCACAGTTGATTTCATCTTCGGCAACGCCGCCGTAGTTTTCCAGAATTGCAACCTCTTCGCTCGAAATCCTCCGAACAAAATCAACACGATCACCGCCCAAGGTCGAACCGATCCGAACCAGAACACCGGAATTTCTATCCACAATTGTAAGGTCACAGCTGCCTCAGATTTACGGCCAGTTCAGAGCTCTGTGAAAACCTATCTTGGAAGGCCATGGCAACAATATTCAAGAACAGTTTTCATGAAGACTTTTCTTGATAGTTTGATTGATCCTTCTGGTTGGTTGGAATGGAGTGGTAACTTTGCCTTGAGTACTTTGTACTACGGAGAGTACATGAATACTGGTTCAGGTTCATCAACTTCAAATCGTGTTATATGGCCTGGATATCATGTGATTTCTAGTGCATCGGAAGCTTCAAAGTTCACTGTCTCAAACTTCATTGGAGGAAATTCGTGGTTGCCCGCCACTAATGTTCCTTTCACTTCTAGTTTATAG 1569 0.4404 MATLFFNSLLLSSLLLLHQFFFSSSVSAYSFNDVKLWCSQTPNPQPCDHFLNQHTNLQHKPINNKDDFFKLSLQLAHDRALAGHENAVSLGPRCRNQREKAAWADCLELYEHTIHKLNKTLDPNTKCTQADTQTWLSSALTNLEACKDGFYELGVQDNVLPLMSNNVTKLLSNTLALNKVPYDDKPSYKDGFPTWVKPGDRKLLQSSSPSSQANVIVAKDGSGHFTTVSAAIGAAPKSNSGRYVIYVKAGIYNEQVEIKLKNIMLVGDGIGKTIITGSNSVGGGTTTFRSATVAVVGDAFIAQDITFRNTAGASNHQAVALRSGSDLSVFYKCSFEGFQDTLYVFSQRQFYRECDIYGTVDFIFGNAAVVFQNCNLFARNPPNKINTITAQGRTDPNQNTGISIHNCKVTAASDLRPVQSSVKTYLGRPWQQYSRTVFMKTFLDSLIDPSGWLEWSGNFALSTLYYGEYMNTGSGSSTSNRVIWPGYHVISSASEASKFTVSNFIGGNSWLPATNVPFTSSL 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0295 522 ProSitePatterns Pectinesterase signature 2. 356 365 IPR033131 -
Prci3g0295 522 FunFam Pectinesterase 208 522 - -
Prci3g0295 522 Pfam Plant invertase/pectin methylesterase inhibitor 34 177 IPR006501 GO:0004857
Prci3g0295 522 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 180 IPR035513 -
Prci3g0295 522 CDD PMEI-like_3 36 179 - -
Prci3g0295 522 Pfam Pectinesterase 214 508 IPR000070 GO:0030599|GO:0042545
Prci3g0295 522 SMART PMEI_2 29 177 IPR006501 GO:0004857
Prci3g0295 522 NCBIfam pectinesterase inhibitor domain 12 180 IPR006501 GO:0004857
Prci3g0295 522 PANTHER PECTINESTERASE 21 514 - -
Prci3g0295 522 SMART complete 247 425 IPR006633 -
Prci3g0295 522 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 181 IPR035513 -
Prci3g0295 522 Gene3D - 208 522 IPR012334 -
Prci3g0295 522 SUPERFAMILY Pectin lyase-like 209 519 IPR011050 -
Prci3g0295 522 ProSitePatterns Pectinesterase signature 1. 239 258 IPR018040 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0295 Prci-Chr3 3852942 3855106 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0295 4 522 Carbohydrate Esterase AT2G45220 66.859 0.0 732
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0295 K01051 - gmx:100781697 840.491