Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0294 ATGGCAGCTTTTCGCTTAGTCATCGTCGTCATAACCCTTGTGTTTGTTCCCTTATTTCTGTTTTGCTCGTCTGTTTCCGGGTACTCATTTAATAATGTTAAGGTTTGGTGCAACCAAACACCTAATCCTCAACCATGTGAGTATTTCCTGAACAACAACAATCAAATTCACAACCAGAAGATTATCATCAAACACAAAGATGATTTTCTCAAACTTTCACTTCAACTTGCCCAAGAGCGAGCCTTGAAAGGTCATGCAACAACTCTCTCATTAGGCCCTAAGTGCAGAAACTCACGTGAGAAAGCTGCATGGGCTGATTGCATTGAGCTTTACGAGCAAGCCATTCAGAAACTCAACAAAACCCTAGACCCCAACACAAAATGCTCCAAAGCTGATGCTCAAACATGGCTCAGCGCAGCTGTCACCAACCTCGACACGTGCCGGGCCGGGTTCTACGAGCTTGGGGTTCAAGACTACGTGTTGCCCTTGATGTCTAACAACGTTACCAAGCTTCTGAGCAACACTTTGGCTCTAAATAAGGTTCAATATCAAGAAGATGAACCGAGTTACTATAATAAAGATGGGTTCCCAACATGGGTGAAGCCTGGTGATAGGAAGCTATTGCAGAGATCTTCTAGTTCTACAGCTACTAAGGCTAACGTTGTGGTGGCTAAAGATGGGTCTGGCAAGTACACGACTTTGAGTGCTGCTATAAATGCTGCACCAAAGAGTAACAGTGGGAGATATGCGATATACGTGAAAGCTGGGATTTACAATGAACAGGTTGAGATAAAGGCAAAGAATATCATGTTGATGGGAGATGGTATTGGGAAGACTATAATCACTGGAAGCAAAAGTGTTGGAGGAGGCACCACAACCTTCCGATCTGCTACTGTTGCTGTCGTAGGAGATGGGTTTATTGCTCGAGACATAACATTTAGGAATACTGCTGGAGCATCGAACCATCAAGCCGTGGCACTTCGTTCTGGATCAGATTTATCTGTTTTCTACAGATGTAGCTTTGAAGGTTACCAAGACACATTATATGTTCACTCTGATAGACAATTCTACAGAGAATGTAACATTTATGGCACTGTGGATTTCATCTTTGGAAATGCAGCAGCAGTTTTCCAAAACTGCAACATTTTTGCCAGAAACCCTCCAAACAAAGTCAACACGATCACGGCCCAAGGTCGAACGGATCCGAACCAAAACACTGGAATTTCCATCCACAATTGTAGGGTTACAGCTGCCTCAGATCTAAAACCAGTTCAGAACTCTGTAAAAACCTATCTTGGAAGGCCATGGAAACAATATTCTCGAACAGTGTTTATGAAGACTTATCTTGATGGCTTGATAAACCAGGCTGGTTGGATGGAATGGAGTGGTAACTTTGCCTTGAACACTTTATATTATGGAGAGTATATGAACACGGGTCCAGGTTCATCAACAGCAAATAGAGTTAAGTGGTCAGGTTACCGTGTGATTACTAGTGCTTCGGAAGCTTCAAAGTTCACTGTTGCTAACTTCATTGGTGGAAACTCATGGATTCCTGCTACTAATGTGCCTTTCACCTCTGCTCTATGA 1587 0.4304 MAAFRLVIVVITLVFVPLFLFCSSVSGYSFNNVKVWCNQTPNPQPCEYFLNNNNQIHNQKIIIKHKDDFLKLSLQLAQERALKGHATTLSLGPKCRNSREKAAWADCIELYEQAIQKLNKTLDPNTKCSKADAQTWLSAAVTNLDTCRAGFYELGVQDYVLPLMSNNVTKLLSNTLALNKVQYQEDEPSYYNKDGFPTWVKPGDRKLLQRSSSSTATKANVVVAKDGSGKYTTLSAAINAAPKSNSGRYAIYVKAGIYNEQVEIKAKNIMLMGDGIGKTIITGSKSVGGGTTTFRSATVAVVGDGFIARDITFRNTAGASNHQAVALRSGSDLSVFYRCSFEGYQDTLYVHSDRQFYRECNIYGTVDFIFGNAAAVFQNCNIFARNPPNKVNTITAQGRTDPNQNTGISIHNCRVTAASDLKPVQNSVKTYLGRPWKQYSRTVFMKTYLDGLINQAGWMEWSGNFALNTLYYGEYMNTGPGSSTANRVKWSGYRVITSASEASKFTVANFIGGNSWIPATNVPFTSAL 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0294 528 Pfam Plant invertase/pectin methylesterase inhibitor 32 178 IPR006501 GO:0004857
Prci3g0294 528 SUPERFAMILY Pectin lyase-like 214 525 IPR011050 -
Prci3g0294 528 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 181 IPR035513 -
Prci3g0294 528 FunFam Pectinesterase 214 528 - -
Prci3g0294 528 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 181 IPR035513 -
Prci3g0294 528 SMART complete 253 431 IPR006633 -
Prci3g0294 528 FunFam Pectinesterase 28 181 - -
Prci3g0294 528 ProSitePatterns Pectinesterase signature 1. 245 264 IPR018040 -
Prci3g0294 528 Gene3D - 214 528 IPR012334 -
Prci3g0294 528 PANTHER PECTINESTERASE 12 520 - -
Prci3g0294 528 ProSitePatterns Pectinesterase signature 2. 362 371 IPR033131 -
Prci3g0294 528 CDD PMEI-like_3 36 180 - -
Prci3g0294 528 NCBIfam pectinesterase inhibitor domain 11 180 IPR006501 GO:0004857
Prci3g0294 528 SMART PMEI_2 28 178 IPR006501 GO:0004857
Prci3g0294 528 Pfam Pectinesterase 220 514 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0294 Prci-Chr3 3838455 3841147 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0294 1 528 Carbohydrate Esterase AT2G45220 67.992 0.0 739
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0294 K01051 - gmx:100783428 866.3