Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0264 ATGGATGGGAATGGAGTAGAGAGGGACCTGGAGATAGAGTCTGGTGGGGTGGCGATGATCATGGCGAATGATTATGGCAAACAACAAGACAGGGAAGACGATACATCAGAGCCATCCTCAGACGACGTCGTCGTCAAAGAAAGCTTTCTCAGAGAGCCTTTGCTTCTCAAGAACAATAGGATGAACAACACCTCGCAGCTCGCCATTGTTGGAGCAAATGTTTGCCCTATTGAAAGTCTTGATTACGAGATGATTGAGAATTATCTATTTAAACAAGATTGGAGGTCTAGAACGAAAGTCGAAATATGCCAATATATTGTTCTTAAATGGACTCTTGCACTTCTAATTGGTTTAAGTACAGGGCTTGTCGGATTTTTCAATAACCTTGCTGTTGAGAACATTGCTGGTTTCAAGCTTCTACTCACTAACAATCTCATGCTCAAAGAAAAGTATTATCAGGCCTTTGCAGCATTTGCCGGTTGTAACATGGTTTTGGCTGTTGCTGCCGCAATCCTCTGTGCTTACATTGCCCCTGCAGCAGCTGGATCTGGCATACCTGAGGTGAAGGCCTACCTCAATGGTATAGATGCCCATTCTATATTGGCTCCAAGTACCCTCTTTGTAAAGATCTTTGGTTCAATTTTTGGTGTTTCTGCGGGGTTTGTTGTTGGTAAGGAAGGACCTATGGTACATACTGGTGCTTGCATAGCCAATTTACTCGGACAAGGTGGTTCTCAAAAGTATCGACTGACATGGAAATGGCTGAGGTTCTTTAAAAATGATCGAGATCGAAGGGATTTGATCACATGTGGTGCAGCTGCAGGGGTTGCTGCTGCCTTCCGAGCTCCAGTTGGTGGTGTCCTTTTTGCACTTGAAGAAGCAGCTTCATGGTGGAGGAGTGCCCTTCTGTGGCGTACTTTCTTTACAACGGCAATAGTAGCAGTAGTGCTAAGAAGTTTCATGGACTTGTGTCGGGGTGGAAACTGTGGTCTTTTTGGGGAAGGCGGGTTGATAATGTTTGATGTTAATGAAGCGAAGCCTGCGTACAGCACTCTTGACCTTCTGGCAGTTGTATTTCTGGGAATCGTTGGAGGCATTTTTGGAAGCCTTTACAATTATCTTGTGGACAAGGTCCTTCGCACTTATAGCATCATCAATGAGAGGGGCCCTGTATTTAAAATTGTACTTGTTGTCACGATCTCCTTTTTGACCTCTTGTTGTTCGTATGGTCTTCCATGGCTATCAAATTGCATCCCTTGTCCTCCTAACTTGGAGGATCAGTGTCCCACTGTAGGTCGCTCCGGCCACTACAAGAATTACCAATGTCCTCCTAACCATTACAATGACCTTGCTTCTCTCTTTTTCACTACTAATGATGATGCCATCCGCAACCTCCTTATAGGCGGCTCTGACAAAAATTTTCATCTTTCTACACTTCTAATCTTCTTTGTTGCAATATACTTCCTTGGAATCATCACTTATGGAATTGCTGTTCCCTCTGGACTATTTATCCCTGTCATACTTGCCGGGGCCTCTTATGGGCGCCTTGCTGGCAGTCTTTTAAGTCCATTCACTGTACTCGATGTTGGATTGTTTGCCCTCCTCGGAGCTGCATCCTTCCTCGGTGGTACCATGAGAATGACTGTTTCTATTTGTGTCATACTCCTTGAACTCACTAATGACCTCCTAATGCTCCCACTGGTAATGCTGGTTCTTCTTGTTTCAAAGACTGTGGCTGATAGCTTCAATAAAGGTGTATATGATCAGATGGTTAAAATGAAGGGGCTGCCTTATATGGAAGCACATGCTGAACCATACATGAGGCATTTAGTCGCAAGTGATGTTGTTTCTGGCCCTCTGATTACTTTTTCTGGGGTTGAAAAGGTGGGGAATATCATCCATGCTTTGAGGATTACTGGCCACCATGGTTTTCCTGTGATTGACGAACCTCCTTTCTCGGCTGCTCCTGAGTTGTGTGGGTTGGTTTTAAGGTCGCATCTGCTTGTGCTTCTTAAGAGGAAGAAGTTCACAAAGCAGAAGGTGATGACAGGGTCTGCGATTTTGAGGAACTTCAAAGCACGTGATTTTGCAAAGCCAGGGTTAGGAAAGGGGCTCAAGCTTGATGATTTGGACATTTCAGAGGAGGAGGTGGAGATGTATGTTGATCTCCATCCAATTACCAATACTTCACCATATACAGTAGTCGAATCGATGTCTCTAGCGAAAGCTGCGGTCCTTTTCCGGGAGCTTGGCCTCAGGCACTTGTTGGTAGTGCCAAAGACACCTGCAAGACCTCCAATTGTTGGGATCTTGACAAGGCATGACTTCATGCCTGAGCACATTTTGGGACTATACCCTCATCTGGATCCACACAAATAG 2379 0.4498 MDGNGVERDLEIESGGVAMIMANDYGKQQDREDDTSEPSSDDVVVKESFLREPLLLKNNRMNNTSQLAIVGANVCPIESLDYEMIENYLFKQDWRSRTKVEICQYIVLKWTLALLIGLSTGLVGFFNNLAVENIAGFKLLLTNNLMLKEKYYQAFAAFAGCNMVLAVAAAILCAYIAPAAAGSGIPEVKAYLNGIDAHSILAPSTLFVKIFGSIFGVSAGFVVGKEGPMVHTGACIANLLGQGGSQKYRLTWKWLRFFKNDRDRRDLITCGAAAGVAAAFRAPVGGVLFALEEAASWWRSALLWRTFFTTAIVAVVLRSFMDLCRGGNCGLFGEGGLIMFDVNEAKPAYSTLDLLAVVFLGIVGGIFGSLYNYLVDKVLRTYSIINERGPVFKIVLVVTISFLTSCCSYGLPWLSNCIPCPPNLEDQCPTVGRSGHYKNYQCPPNHYNDLASLFFTTNDDAIRNLLIGGSDKNFHLSTLLIFFVAIYFLGIITYGIAVPSGLFIPVILAGASYGRLAGSLLSPFTVLDVGLFALLGAASFLGGTMRMTVSICVILLELTNDLLMLPLVMLVLLVSKTVADSFNKGVYDQMVKMKGLPYMEAHAEPYMRHLVASDVVSGPLITFSGVEKVGNIIHALRITGHHGFPVIDEPPFSAAPELCGLVLRSHLLVLLKRKKFTKQKVMTGSAILRNFKARDFAKPGLGKGLKLDDLDISEEEVEMYVDLHPITNTSPYTVVESMSLAKAAVLFRELGLRHLLVVPKTPARPPIVGILTRHDFMPEHILGLYPHLDPHK 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0264 792 Pfam Voltage gated chloride channel 166 580 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Prci3g0264 792 PRINTS Chloride channel signature 530 546 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Prci3g0264 792 PRINTS Chloride channel signature 586 600 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Prci3g0264 792 PRINTS Chloride channel signature 178 195 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Prci3g0264 792 PRINTS Chloride channel signature 548 567 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Prci3g0264 792 PRINTS Chloride channel signature 209 228 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Prci3g0264 792 PRINTS Chloride channel signature 498 518 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Prci3g0264 792 PRINTS Chloride channel signature 273 292 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Prci3g0264 792 Gene3D Clc chloride channel 101 598 - -
Prci3g0264 792 Gene3D - 599 778 IPR046342 -
Prci3g0264 792 MobiDBLite consensus disorder prediction 26 42 - -
Prci3g0264 792 Pfam CBS domain 728 776 IPR000644 -
Prci3g0264 792 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 56 782 - -
Prci3g0264 792 SUPERFAMILY Clc chloride channel 86 601 IPR014743 -
Prci3g0264 792 FunFam Chloride channel ClC3 101 417 - -
Prci3g0264 792 CDD ClC_6_like 78 599 - -
Prci3g0264 792 ProSiteProfiles CBS domain profile. 726 790 IPR000644 -
Prci3g0264 792 MobiDBLite consensus disorder prediction 23 42 - -
Prci3g0264 792 SMART cbs_1 619 672 IPR000644 -
Prci3g0264 792 SMART cbs_1 730 781 IPR000644 -
Prci3g0264 792 PRINTS Plant CLC chloride channel signature 308 318 IPR002251 GO:0005247|GO:0006821|GO:0016020
Prci3g0264 792 PRINTS Plant CLC chloride channel signature 450 466 IPR002251 GO:0005247|GO:0006821|GO:0016020
Prci3g0264 792 PRINTS Plant CLC chloride channel signature 83 91 IPR002251 GO:0005247|GO:0006821|GO:0016020
Prci3g0264 792 PRINTS Plant CLC chloride channel signature 326 333 IPR002251 GO:0005247|GO:0006821|GO:0016020
Prci3g0264 792 PRINTS Plant CLC chloride channel signature 294 302 IPR002251 GO:0005247|GO:0006821|GO:0016020
Prci3g0264 792 CDD CBS_pair_voltage-gated_CLC_euk_bac 612 779 - -
Prci3g0264 792 SUPERFAMILY CBS-domain pair 603 777 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0264 Prci-Chr3 3488624 3494562 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0264 50 792 Ion Channels AT5G49890 79.570 0.0 1184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0264 K05016 - cave:132178584 1233.78