Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci3g0209 | ATGTCCCTCTTCATCAACCCTGGCCTTGGCTACTCCATTGCCATCGCCCTCGCCTTCCTCGTCCTTGCTTCCACTCTCATTCTCTCTTTCTACCTCTGCTGCCGCAACCGTAACCGCAACCCCAATTTGAATTCGGACCCGAATCCGAACATGAACCCATCTGGGTCCAATGCGGGATCCGAGGGTATTGTTCTGCCACGGGTGATTTTTGTGGCGGAGGAGGAGGATGATAACGAGAGCGCCGTCGTGGGGCTCGACGAGAACGTGATCAACTCGTACCCGAGGCTGCAGTACAGCAGGGGAGCTATGGGTGTTGGGAGCAGTACGATGTGTTCGATCTGTCTGTGTGAGTATAGAGATTCGGAGATCCTGAGGATGATGCCGGAGTGTCGCCATTACTTCCACCTCTGGTGCCTTGACGCTTGGCTTAAGTTAAATGGGTCGTGCCCTGTTTGCCGGAACTCGCCGCTCATGACGCCGATTTCGACGCCTCTGCAAGAAGTGGTGCCGCTCTCTCAGTACCCGGCTGATCGGAGGCGACGGAGGTGA | 549 | 0.5628 | MSLFINPGLGYSIAIALAFLVLASTLILSFYLCCRNRNRNPNLNSDPNPNMNPSGSNAGSEGIVLPRVIFVAEEEDDNESAVVGLDENVINSYPRLQYSRGAMGVGSSTMCSICLCEYRDSEILRMMPECRHYFHLWCLDAWLKLNGSCPVCRNSPLMTPISTPLQEVVPLSQYPADRRRRR | 182 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci3g0209 | 182 | Pfam | Ring finger domain | 110 | 153 | IPR001841 | - | |
Prci3g0209 | 182 | SUPERFAMILY | RING/U-box | 110 | 158 | - | - | |
Prci3g0209 | 182 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 71 | 157 | IPR013083 | - | |
Prci3g0209 | 182 | ProSiteProfiles | Zinc finger RING-type profile. | 111 | 153 | IPR001841 | - | |
Prci3g0209 | 182 | PANTHER | RING-H2 FINGER PROTEIN ATL67 | 4 | 181 | IPR044289 | GO:0016567|GO:0016740 | |
Prci3g0209 | 182 | SMART | ring_2 | 111 | 152 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci3g0209 | Prci-Chr3 | 2826051 | 2827035 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci3g0209 | 8 | 175 | C3H Transcription Factor Family | AT5G06490 | 34.463 | 6.66e-33 | 114 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci3g0209 | - | - | qlo:115983169 | 248.44 |