Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0209 ATGTCCCTCTTCATCAACCCTGGCCTTGGCTACTCCATTGCCATCGCCCTCGCCTTCCTCGTCCTTGCTTCCACTCTCATTCTCTCTTTCTACCTCTGCTGCCGCAACCGTAACCGCAACCCCAATTTGAATTCGGACCCGAATCCGAACATGAACCCATCTGGGTCCAATGCGGGATCCGAGGGTATTGTTCTGCCACGGGTGATTTTTGTGGCGGAGGAGGAGGATGATAACGAGAGCGCCGTCGTGGGGCTCGACGAGAACGTGATCAACTCGTACCCGAGGCTGCAGTACAGCAGGGGAGCTATGGGTGTTGGGAGCAGTACGATGTGTTCGATCTGTCTGTGTGAGTATAGAGATTCGGAGATCCTGAGGATGATGCCGGAGTGTCGCCATTACTTCCACCTCTGGTGCCTTGACGCTTGGCTTAAGTTAAATGGGTCGTGCCCTGTTTGCCGGAACTCGCCGCTCATGACGCCGATTTCGACGCCTCTGCAAGAAGTGGTGCCGCTCTCTCAGTACCCGGCTGATCGGAGGCGACGGAGGTGA 549 0.5628 MSLFINPGLGYSIAIALAFLVLASTLILSFYLCCRNRNRNPNLNSDPNPNMNPSGSNAGSEGIVLPRVIFVAEEEDDNESAVVGLDENVINSYPRLQYSRGAMGVGSSTMCSICLCEYRDSEILRMMPECRHYFHLWCLDAWLKLNGSCPVCRNSPLMTPISTPLQEVVPLSQYPADRRRRR 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0209 182 Pfam Ring finger domain 110 153 IPR001841 -
Prci3g0209 182 SUPERFAMILY RING/U-box 110 158 - -
Prci3g0209 182 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 71 157 IPR013083 -
Prci3g0209 182 ProSiteProfiles Zinc finger RING-type profile. 111 153 IPR001841 -
Prci3g0209 182 PANTHER RING-H2 FINGER PROTEIN ATL67 4 181 IPR044289 GO:0016567|GO:0016740
Prci3g0209 182 SMART ring_2 111 152 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0209 Prci-Chr3 2826051 2827035 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0209 8 175 C3H Transcription Factor Family AT5G06490 34.463 6.66e-33 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0209 - - qlo:115983169 248.44