Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0196 ATGGAACTTTCAGAAACCAGACCAAGTCAGCCCCACCACCGCCAACAACATCGTCAGAACCATCAGCAGTATTTGCAGCAGCAGCAACAAAATCAGTTACAGTTGCCTCCGTTGTCGCAGATTGCTGTGGTCCCTTTTGACGGAGGAAGAGGAGGTCCCTCGTCTTGCATCAATGTGGGCTCCACCATCTCTATCCAAGCTGGCCTCTCTGCTGCTACGGCTGCTTCTGCTTCTTTGTCACCTTCTCCTACTTCTTCTTCTTCGTCGTCCTCGTCATCTTCAGCTCCGGTTAATTCTCTCATCGATGCCTCTCCTGCCATCGACATCCCTAGATCTGACCCTGAATCATCTGCTGATCCATCCAGGCTTCTGCTTGATTCGATCAGGAGACAAGAAGTTCGGCGACAGTTGTTAATCTCTACAGGGACGGCGGCGGCAGTGGCGGAGAGGAATGTAGGTGCGAACAGGCCAAAAACGAAGGACAGACACACCAAGGTTGATGGTCGTGGCCGGAGAATTAGAATTCCGGCAGGCTGTGCGTCTAGGGTTTTTCAGTTAACCAAGGAGCTGGGTCTGAAGTCCGACGGAGAGACGATCGAGTGGCTTCTGCAGCACGCGGAGCCGGCAATCATGGCCGCCACTGGCACCGGCACGTTGTCCTCAAACTTCTCAACTCTCAACCCGTCGCATCGGAGTGGTGGGTCCACTTTCTCGGCTCCGCCGACGAGGTTTGCTCCGAATACATTTCATGGAGTTGTAGCACCCTCTGCTAATCATCAACCTTTCGAAGAACTGTATCCGCGTTCTACTTTGTTAGGGTTAATGCAGCAATATCAACCTCAGCAACAAGACGACCAAATTCATCTATTGACCGCCGGTCAAATTCCAGAAGAGCTACCAGGTGCCGCCGGCGGAGCAGTGAACGTCGGAGAATCCACTGAAGATTATACGAGAAAACGTTTCCGAGAAGACTCTATCCAAGAACAAATACAACAACACGTGGATGTTGACTCGCAATTTCAGAAGCAACCACAACAGCTGCTGCAAAAAGGACCTTCGACTTTGAACGTCCTTCGTCCACCTACCAATTTCCTCCGCACCCCAATGTGGGCAGTGGCTCCATCTGATCCCGGCGGCGGCTCTGTCGGTAGCACATTTTGGATGCAAACCAGCTGGAGTGGAGGTACTGGTATCGCCGCCACAGACAGCGTCAGTTATGGATCATTTCCGACGGCACAGACTGGTAGGTTGTGGAAGCATGAATCAGTTTCAAGGCTCGCCGCAATTCAGTTATCCCCATGGAAATGTCGAATTTCAAGGTGGTGGGAGTGGCGGAGGTCATCTGCAACTGGCACCGACGTCGTCGTTTTTGCTGCCTCCTCAGGCTCAGATGATGGATCAGTCCGACGTGGCTGCATTGAATGCTGCGTTTCCTAG 1437 0.5247 MELSETRPSQPHHRQQHRQNHQQYLQQQQQNQLQLPPLSQIAVVPFDGGRGGPSSCINVGSTISIQAGLSAATAASASLSPSPTSSSSSSSSSSAPVNSLIDASPAIDIPRSDPESSADPSRLLLDSIRRQEVRRQLLISTGTAAAVAERNVGANRPKTKDRHTKVDGRGRRIRIPAGCASRVFQLTKELGLKSDGETIEWLLQHAEPAIMAATGTGTLSSNFSTLNPSHRSGGSTFSAPPTRFAPNTFHGVVAPSANHQPFEELYPRSTLLGLMQQYQPQQQDDQIHLLTAGQIPEELPGAAGGAVNVGESTEDYTRKRFREDSIQEQIQQHVDVDSQFQKQPQQLLQKGPSTLNVLRPPTNFLRTPMWAVAPSDPGGGSVGSTFWMQTSWSGGTGIAATDSVSYGSFPTAQTGRLWKHESVSRLAAIQLSPWKCRISRWWEWRRSSATGTDVVVFAASSGSDDGSVRRGCIECCVS 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0196 478 ProSiteProfiles TCP domain profile. 159 213 IPR017887 -
Prci3g0196 478 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 84 407 IPR005333 GO:0003700
Prci3g0196 478 Pfam TCP family transcription factor 158 276 IPR017887 -
Prci3g0196 478 MobiDBLite consensus disorder prediction 1 33 - -
Prci3g0196 478 MobiDBLite consensus disorder prediction 77 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0196 Prci-Chr3 2679408 2680844 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0196 154 395 TCP Transcription Factor Family AT1G72010 42.636 7.92e-37 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Prci3g0196 TCP 1.8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0196 - - pcin:129301586 687.567