Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci3g0180 ATGGCCCTGACCTTGCATGCACGGAAAACAAACAAAAATACTTACAAGATATTCATTACAGCAGAGTATAGTGGTGTGGAAGTTAAACTTGCACCAAATTTTGAGATGGGTGTTTCTAATAAAACTCCTCAATATCTCAACATGAACCCTATTGGCAAGGTTCCTGTGTTGGAAACACCAAATGGTCCAATATTTGAGAGTAATGCAATTGCTCGCTATGTTGCTCGGTTGAAGAGTGACAATGCATTGTATGGATCTTCTCTCATTGACTATGCTCAAATTGAACAGTGGATTGACTTTTCCACATTAGAAATAGACGCTAATATTAATGCTTGGTACCGACCAAGAAATGGACAAGCCCCTTACCATCTTCCCGTTGAGGAAGCTAAAATTTCTGCATTGAAGAGAGCCTTGGGGGCATTGAACACTCACCTCGCTTCTAATACTTACCTGGTTGGGCAATCTGTGACCTTAGCTGACATCATCATGACGTGCAATTTGCATAGAGGTTTCACTCGCCTCATGACCAAGGGCTTCACCTCAGAGTTCCCTCACGTAGAGAGATACTTTTGGGCCTTAGTCCATGAGCCCAAATTCCAAACGATCATAGGTGACGTTAAGCAGACTGAGGCTGTTCTTCCTCTGCAAGCTCCACAGATGCCTTATTAA 669 0.4275 MALTLHARKTNKNTYKIFITAEYSGVEVKLAPNFEMGVSNKTPQYLNMNPIGKVPVLETPNGPIFESNAIARYVARLKSDNALYGSSLIDYAQIEQWIDFSTLEIDANINAWYRPRNGQAPYHLPVEEAKISALKRALGALNTHLASNTYLVGQSVTLADIIMTCNLHRGFTRLMTKGFTSEFPHVERYFWALVHEPKFQTIIGDVKQTEAVLPLQAPQMPY 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci3g0180 222 Gene3D - 80 216 - -
Prci3g0180 222 SFLD Main (cytGST) 3 190 - -
Prci3g0180 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
Prci3g0180 222 CDD GST_C_EF1Bgamma_like 90 210 - -
Prci3g0180 222 Pfam Glutathione S-transferase, C-terminal domain 130 197 IPR004046 -
Prci3g0180 222 FunFam Elongation factor 1B gamma 1 74 - -
Prci3g0180 222 SUPERFAMILY GST C-terminal domain-like 73 212 IPR036282 -
Prci3g0180 222 Pfam Glutathione S-transferase, N-terminal domain 3 76 IPR004045 -
Prci3g0180 222 FunFam Elongation factor 1 gamma 80 216 - -
Prci3g0180 222 SFLD Glutathione Transferase (cytosolic) 3 190 IPR040079 -
Prci3g0180 222 PANTHER ELONGATION FACTOR 1-GAMMA 1-RELATED 1 216 IPR044628 GO:0004364
Prci3g0180 222 SUPERFAMILY Thioredoxin-like 2 85 IPR036249 -
Prci3g0180 222 CDD GST_N_EF1Bgamma 3 77 - -
Prci3g0180 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 215 IPR010987 -
Prci3g0180 222 Gene3D Glutaredoxin 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci3g0180 Prci-Chr3 2621028 2626827 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci3g0180 1 219 Eukaryotic Initiation Factors Gene Family AT1G57720 65.315 3.46e-105 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci3g0180 K03233 - qsa:O6P43_031468 343.199